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  5. Pnu_g29456

Pnu_g29456


Description : transcriptional co-regulator *(OFP) & original description: none


Gene families : OG0000209 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g29456

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00103p00131630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.02 OrthoFinder output from all 47 species
AT1G06920 OFP4, ATOFP4 ovate family protein 4 0.02 OrthoFinder output from all 47 species
AT5G58360 ATOFP3, OFP3 ovate family protein 3 0.02 OrthoFinder output from all 47 species
Adi_g115738 No alias transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25921 No alias transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05496 No alias transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08880 ATOFP3, OFP3 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19823 ATOFP7, OFP7 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g21863 ATOFP7, OFP7 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05542 ATOFP7, OFP7 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30223.t1 Aspi01Gene30223 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71915.t1 ATOFP3, OFP3,... transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0064.g035682 ATOFP1, OFP1 transcriptional co-regulator *(OFP) & original... 0.02 OrthoFinder output from all 47 species
Cba_g16868 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.05G069100.1 Ceric.05G069100 transcriptional co-regulator *(OFP) & original... 0.02 OrthoFinder output from all 47 species
Ceric.09G019000.1 Ceric.09G019000 transcriptional co-regulator *(OFP) & original... 0.03 OrthoFinder output from all 47 species
Dac_g08592 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06375 No alias transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26841 ATOFP7, OFP7 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01017105001 OFP14, ATOFP14 RNA biosynthesis.transcriptional activation.OFP... 0.03 OrthoFinder output from all 47 species
LOC_Os02g45620.1 LOC_Os02g45620 transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
LOC_Os03g06350.1 OFP11, atofp11,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
LOC_Os04g37510.1 OFP8, ATOFP8,... transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
LOC_Os04g48830.1 ATOFP3, OFP3,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
LOC_Os05g36990.1 ATOFP7, OFP7,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
LOC_Os05g44090.1 ATOFP5, OFP5,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
LOC_Os07g48150.1 ATOFP7, OFP7,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
LOC_Os10g38880.1 OFP8, ATOFP8,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Len_g12547 No alias transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08126 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31353 OFP4, ATOFP4 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08652 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13520 No alias transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g61964 No alias transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31234 ATOFP3, OFP3 transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19051 No alias transcriptional co-regulator *(OFP) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g49665 No alias transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g08846 ATOFP5, OFP5 transcriptional co-regulator *(OFP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g31037 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e019186_P001 Zm00001e019186 transcription factor (OFP) 0.03 OrthoFinder output from all 47 species
Zm00001e019432_P001 OFP4, ATOFP4,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species
Zm00001e041975_P001 ATOFP13, OFP13,... transcription factor (OFP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR006458 Ovate_C 187 243
No external refs found!