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  5. AT1G67360

AT1G67360


Description : Rubber elongation factor protein (REF)


Gene families : OG0001058 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001058_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G67360

Target Alias Description ECC score Gene Family Method Actions
Adi_g084322 No alias lipid droplet-associated factor *(LDAP) & original... 0.03 OrthoFinder output from all 47 species
Als_g34747 No alias lipid droplet-associated factor *(LDAP) & original... 0.02 OrthoFinder output from all 47 species
Als_g37463 No alias lipid droplet-associated factor *(LDAP) & original... 0.02 OrthoFinder output from all 47 species
Als_g45361 No alias lipid droplet-associated factor *(LDAP) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene38746.t1 Aspi01Gene38746 lipid droplet-associated factor *(LDAP) & original... 0.03 OrthoFinder output from all 47 species
Ceric.17G068200.1 Ceric.17G068200 lipid droplet-associated factor *(LDAP) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01031148001 No alias Lipid metabolism.lipid bodies-associated activities.LDAP protein 0.03 OrthoFinder output from all 47 species
Len_g15704 No alias lipid droplet-associated factor *(LDAP) & original... 0.02 OrthoFinder output from all 47 species
MA_13880g0010 STP7 associated factor (LDAP) 0.02 OrthoFinder output from all 47 species
Ppi_g14800 No alias lipid droplet-associated factor *(LDAP) & original... 0.04 OrthoFinder output from all 47 species
Spa_g22224 No alias lipid droplet-associated factor *(LDAP) & original... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005773 vacuole IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004512 inositol-3-phosphate synthase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005782 peroxisomal matrix IEP HCCA
CC GO:0005853 eukaryotic translation elongation factor 1 complex IEP HCCA
BP GO:0006012 galactose metabolic process IEP HCCA
BP GO:0006020 inositol metabolic process IEP HCCA
BP GO:0006021 inositol biosynthetic process IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006743 ubiquinone metabolic process IEP HCCA
BP GO:0006744 ubiquinone biosynthetic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0006986 response to unfolded protein IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008378 galactosyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009408 response to heat IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010264 myo-inositol hexakisphosphate biosynthetic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
BP GO:0016093 polyprenol metabolic process IEP HCCA
BP GO:0016094 polyprenol biosynthetic process IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0019348 dolichol metabolic process IEP HCCA
BP GO:0019408 dolichol biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031907 microbody lumen IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032958 inositol phosphate biosynthetic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0033517 myo-inositol hexakisphosphate metabolic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034605 cellular response to heat IEP HCCA
BP GO:0034620 cellular response to unfolded protein IEP HCCA
BP GO:0034976 response to endoplasmic reticulum stress IEP HCCA
MF GO:0035250 UDP-galactosyltransferase activity IEP HCCA
BP GO:0035967 cellular response to topologically incorrect protein IEP HCCA
BP GO:0036294 cellular response to decreased oxygen levels IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042181 ketone biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
BP GO:0042816 vitamin B6 metabolic process IEP HCCA
BP GO:0042819 vitamin B6 biosynthetic process IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
MF GO:0045547 dehydrodolichyl diphosphate synthase activity IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:0046686 response to cadmium ion IEP HCCA
MF GO:0046982 protein heterodimerization activity IEP HCCA
MF GO:0047216 inositol 3-alpha-galactosyltransferase activity IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051592 response to calcium ion IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0070887 cellular response to chemical stimulus IEP HCCA
BP GO:0071241 cellular response to inorganic substance IEP HCCA
BP GO:0071248 cellular response to metal ion IEP HCCA
BP GO:0071277 cellular response to calcium ion IEP HCCA
BP GO:0071310 cellular response to organic substance IEP HCCA
BP GO:0071453 cellular response to oxygen levels IEP HCCA
BP GO:0071456 cellular response to hypoxia IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0098754 detoxification IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901661 quinone metabolic process IEP HCCA
BP GO:1901663 quinone biosynthetic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
InterPro domains Description Start Stop
IPR008802 REF 8 207
No external refs found!