AT1G67950

Description : RNA-binding (RRM/RBD/RNP motifs) family protein

Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G67950

Target	Alias	Description	ECC score	Gene Family Method
Aev_g29090	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g16098	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene50706.t2	Aspi01Gene50706	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g07449	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Dde_g13304	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g04385	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Nbi_g06044	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g07946	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g33391	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g58605	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Tin_g28029	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000096	sulfur amino acid metabolic process	None	Extended
BP	GO:0000097	sulfur amino acid biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006534	cysteine metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008652	amino acid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009069	serine family amino acid metabolic process	None	Extended
BP	GO:0009070	serine family amino acid biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0019344	cysteine biosynthetic process	RCA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901605	alpha-amino acid metabolic process	None	Extended
BP	GO:1901607	alpha-amino acid biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	33	92

External Links

No external refs found!

AT1G67950

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation