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  5. AT1G68510

AT1G68510 (LBD42)


Aliases : LBD42

Description : LOB domain-containing protein 42


Gene families : OG0001073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G68510

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00088960 LBD41,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
AMTR_s00137p00051070 LBD39,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
Adi_g036525 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g041713 LBD37, ASL39 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086054 LBD38 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g108649 LBD38 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20695 LBD37, ASL39 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02104 LBD38 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38372.t1 LBD38, Aspi01Gene38372 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18542 LBD38 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G017400.1 LBD38, Ceric.08G017400 AS2/LOB-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.1Z284100.1 LBD38, Ceric.1Z284100 not classified & original description: pacid=50628197... 0.02 OrthoFinder output from all 47 species
Ceric.31G029400.1 LBD38, Ceric.31G029400 AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g15482 LBD38 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01009360001 LBD38 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.07 OrthoFinder output from all 47 species
GSVIVT01011895001 LBD41 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 OrthoFinder output from all 47 species
GSVIVT01011896001 LBD42 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
LOC_Os03g41330.1 LBD37, ASL39,... transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Len_g17305 LBD38 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431035g0010 LBD41 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
MA_122595g0010 LBD38 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
MA_19934g0010 LBD40 transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
MA_223267g0010 LBD40 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_70989g0010 LBD40 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
MA_80122g0010 LBD42 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Mp3g12980.1 LBD37, ASL39 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Pir_g01919 LBD38 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32695 LBD38 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g077990.3.1 LBD38, Solyc04g077990 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Solyc05g009320.4.1 LBD41, Solyc05g009320 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Spa_g04493 LBD38 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14153 LBD38 AS2/LOB-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008115 sarcosine oxidase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009225 nucleotide-sugar metabolic process IEP HCCA
BP GO:0009686 gibberellin biosynthetic process IEP HCCA
BP GO:0009834 plant-type secondary cell wall biogenesis IEP HCCA
BP GO:0010054 trichoblast differentiation IEP HCCA
BP GO:0010417 glucuronoxylan biosynthetic process IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0016602 CCAAT-binding factor complex IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016647 oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
CC GO:0031012 extracellular matrix IEP HCCA
BP GO:0033356 UDP-L-arabinose metabolic process IEP HCCA
BP GO:0042335 cuticle development IEP HCCA
MF GO:0045544 gibberellin 20-oxidase activity IEP HCCA
MF GO:0052691 UDP-arabinopyranose mutase activity IEP HCCA
MF GO:0080043 quercetin 3-O-glucosyltransferase activity IEP HCCA
MF GO:0080044 quercetin 7-O-glucosyltransferase activity IEP HCCA
MF GO:0080116 glucuronoxylan glucuronosyltransferase activity IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 4 101
No external refs found!