AT1G68800 (TCP12, BRC2)

Aliases : TCP12, BRC2

Description : TCP domain protein 12

Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G68800
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00158020	TCP4, MEE35,...	RNA biosynthesis.transcriptional activation.TCP...	0.06	OrthoFinder output from all 47 species
AT3G18550	BRC1, ATTCP18, TCP18	TCP family transcription factor	0.04	OrthoFinder output from all 47 species
Aev_g30836	TCP10	TCP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g30415	TCP2	TCP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene02912.t1	ATTCP24, TCP24,...	TCP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene52180.t1	TCP3, Aspi01Gene52180	TCP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene55158.t1	TCP5, Aspi01Gene55158	TCP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene64947.t1	TCP3, Aspi01Gene64947	TCP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.25G064100.1	ATTCP24, TCP24,...	TCP-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g28469	TCP3	TCP-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g07031	TCP13, TFPD, PTF1	TCP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g07001	TCP3	TCP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01008109001	TCP5	RNA biosynthesis.transcriptional activation.TCP...	0.04	OrthoFinder output from all 47 species
GSVIVT01021528001	ATTCP24, TCP24	RNA biosynthesis.transcriptional activation.TCP...	0.03	OrthoFinder output from all 47 species
Gb_18221	TCP4, MEE35	transcription factor (TCP)	0.04	OrthoFinder output from all 47 species
Gb_30049	TCP2	transcription factor (TCP)	0.03	OrthoFinder output from all 47 species
LOC_Os01g11550.1	TCP4, MEE35,...	transcription factor (TCP)	0.05	OrthoFinder output from all 47 species
LOC_Os07g05720.1	TCP2, LOC_Os07g05720	transcription factor (TCP)	0.06	OrthoFinder output from all 47 species
Len_g03300	TCP2	TCP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_101752g0020	ATTCP24, TCP24	transcription factor (TCP)	0.04	OrthoFinder output from all 47 species
MA_4774g0010	TCP2	transcription factor (TCP)	0.06	OrthoFinder output from all 47 species
Pir_g25790	TCP2	TCP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g26630	TCP2	TCP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g02212	TCP3	TCP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc03g045030.2.1	TCP12, BRC2,...	transcription factor (TCP)	0.03	OrthoFinder output from all 47 species
Solyc03g119770.4.1	TCP12, BRC2,...	transcription factor (TCP)	0.04	OrthoFinder output from all 47 species
Solyc06g069240.2.1	TCP12, BRC2,...	transcription factor (TCP)	0.03	OrthoFinder output from all 47 species
Zm00001e032821_P001	TCP2, Zm00001e032821	transcription factor (TCP)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060688	regulation of morphogenesis of a branching structure	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1905428	regulation of plant organ formation	None	Extended
BP	GO:2000032	regulation of secondary shoot formation	IMP	Interproscan
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006414	translational elongation	IEP	HCCA
BP	GO:0009411	response to UV	IEP	HCCA
BP	GO:0010048	vernalization response	IEP	HCCA
CC	GO:0022626	cytosolic ribosome	IEP	HCCA
BP	GO:0043473	pigmentation	IEP	HCCA
BP	GO:0043476	pigment accumulation	IEP	HCCA
BP	GO:0043478	pigment accumulation in response to UV light	IEP	HCCA
BP	GO:0043479	pigment accumulation in tissues in response to UV light	IEP	HCCA
BP	GO:0043480	pigment accumulation in tissues	IEP	HCCA
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	IEP	HCCA
BP	GO:0048437	floral organ development	IEP	HCCA
BP	GO:0048440	carpel development	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR017887	TF_TCP_subgr	111	237

External Links

No external refs found!

AT1G68800 (TCP12, BRC2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation