AT1G69830 (AMY3, ATAMY3)

Aliases : AMY3, ATAMY3

Description : alpha-amylase-like 3

Gene families : OG0000515 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000515_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G69830
Cluster	HCCA: Cluster_54

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00078p00105470	AMY3, ATAMY3,...	Carbohydrate metabolism.starch...	0.04	OrthoFinder output from all 47 species
Adi_g020848	AMY1, ATAMY1	alpha amylase & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g12545	AMY1, ATAMY1	alpha amylase & original description: none	0.02	OrthoFinder output from all 47 species
Als_g62354	AMY2, ATAMY2	alpha amylase & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g18360	AMY3, ATAMY3	alpha amylase & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g20926	AMY1, ATAMY1	alpha amylase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene13966.t1	AMY3, ATAMY3,...	alpha amylase & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene38425.t1	AMY2, ATAMY2,...	alpha amylase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene40723.t1	AMY3, ATAMY3,...	alpha amylase & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene40723.t2	AMY3, ATAMY3,...	alpha amylase & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene52326.t1	AMY1, ATAMY1,...	alpha amylase & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g20696	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g67761	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.06G047800.1	AMY3, ATAMY3,...	alpha amylase & original description: pacid=50620852...	0.04	OrthoFinder output from all 47 species
Cre08.g362450	AMY2, ATAMY2	Carbohydrate metabolism.starch...	0.02	OrthoFinder output from all 47 species
Dac_g11521	AMY1, ATAMY1	alpha amylase & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g16674	AMY3, ATAMY3	alpha amylase & original description: none	0.09	OrthoFinder output from all 47 species
Gb_18574	AMY3, ATAMY3	alpha amylase	0.04	OrthoFinder output from all 47 species
LOC_Os06g49970.2	AMY1, ATAMY1,...	alpha amylase	0.02	OrthoFinder output from all 47 species
Mp1g24800.1	AMY1, ATAMY1	alpha amylase	0.03	OrthoFinder output from all 47 species
Mp2g22120.1	AMY2, ATAMY2	alpha amylase	0.05	OrthoFinder output from all 47 species
Mp3g22820.1	AMY3, ATAMY3	alpha amylase	0.04	OrthoFinder output from all 47 species
Nbi_g25602	AMY3, ATAMY3	alpha amylase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g02338	AMY2, ATAMY2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g07501	AMY3, ATAMY3	alpha amylase & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g35955	AMY1, ATAMY1	alpha amylase & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0102.g019864	AMY3, ATAMY3	alpha amylase & original description: CDS=226-6474	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004556	alpha-amylase activity	IDA	Interproscan
MF	GO:0004556	alpha-amylase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0005982	starch metabolic process	RCA	Interproscan
BP	GO:0005983	starch catabolic process	TAS	Interproscan
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0007623	circadian rhythm	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009251	glucan catabolic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044247	cellular polysaccharide catabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0044275	cellular carbohydrate catabolic process	None	Extended
BP	GO:0048511	rhythmic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000025	maltose catabolic process	IEP	HCCA
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0001101	response to acid chemical	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0004134	4-alpha-glucanotransferase activity	IEP	HCCA
MF	GO:0004645	1,4-alpha-oligoglucan phosphorylase activity	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
MF	GO:0008320	protein transmembrane transporter activity	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0009250	glucan biosynthetic process	IEP	HCCA
BP	GO:0009266	response to temperature stimulus	IEP	HCCA
BP	GO:0009313	oligosaccharide catabolic process	IEP	HCCA
BP	GO:0009409	response to cold	IEP	HCCA
BP	GO:0009414	response to water deprivation	IEP	HCCA
BP	GO:0009415	response to water	IEP	HCCA
CC	GO:0009526	plastid envelope	IEP	HCCA
CC	GO:0009527	plastid outer membrane	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009607	response to biotic stimulus	IEP	HCCA
BP	GO:0009608	response to symbiont	IEP	HCCA
BP	GO:0009610	response to symbiotic fungus	IEP	HCCA
BP	GO:0009617	response to bacterium	IEP	HCCA
BP	GO:0009620	response to fungus	IEP	HCCA
BP	GO:0009628	response to abiotic stimulus	IEP	HCCA
BP	GO:0009631	cold acclimation	IEP	HCCA
BP	GO:0009664	plant-type cell wall organization	IEP	HCCA
CC	GO:0009707	chloroplast outer membrane	IEP	HCCA
BP	GO:0009718	anthocyanin-containing compound biosynthetic process	IEP	HCCA
BP	GO:0009743	response to carbohydrate	IEP	HCCA
BP	GO:0009749	response to glucose	IEP	HCCA
CC	GO:0009941	chloroplast envelope	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
MF	GO:0010297	heteropolysaccharide binding	IEP	HCCA
BP	GO:0010353	response to trehalose	IEP	HCCA
MF	GO:0015171	amino acid transmembrane transporter activity	IEP	HCCA
MF	GO:0015450	protein-transporting ATPase activity	IEP	HCCA
MF	GO:0015562	efflux transmembrane transporter activity	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016781	phosphotransferase activity, paired acceptors	IEP	HCCA
MF	GO:0019200	carbohydrate kinase activity	IEP	HCCA
BP	GO:0019252	starch biosynthetic process	IEP	HCCA
CC	GO:0019867	outer membrane	IEP	HCCA
MF	GO:0022884	macromolecule transmembrane transporter activity	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA
BP	GO:0031425	chloroplast RNA processing	IEP	HCCA
CC	GO:0031968	organelle outer membrane	IEP	HCCA
CC	GO:0031969	chloroplast membrane	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0034285	response to disaccharide	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
CC	GO:0042170	plastid membrane	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0042742	defense response to bacterium	IEP	HCCA
BP	GO:0043207	response to external biotic stimulus	IEP	HCCA
MF	GO:0044183	protein folding chaperone	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	HCCA
BP	GO:0045036	protein targeting to chloroplast	IEP	HCCA
BP	GO:0045037	protein import into chloroplast stroma	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
BP	GO:0046283	anthocyanin-containing compound metabolic process	IEP	HCCA
BP	GO:0046352	disaccharide catabolic process	IEP	HCCA
MF	GO:0050521	alpha-glucan, water dikinase activity	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0051707	response to other organism	IEP	HCCA
MF	GO:0051752	phosphoglucan, water dikinase activity	IEP	HCCA
BP	GO:0061077	chaperone-mediated protein folding	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	HCCA
BP	GO:0072596	establishment of protein localization to chloroplast	IEP	HCCA
BP	GO:0072598	protein localization to chloroplast	IEP	HCCA
BP	GO:0098542	defense response to other organism	IEP	HCCA
MF	GO:0140318	protein transporter activity	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR012850	A-amylase_bs_C	827	885
IPR006047	Glyco_hydro_13_cat_dom	518	778

External Links

No external refs found!

AT1G69830 (AMY3, ATAMY3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation