AT1G70550

Description : Protein of Unknown Function (DUF239)

Gene families : OG0000248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000248_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G70550

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00120p00051630	evm_27.TU.AmTr_v1...	No description available	0.07	OrthoFinder output from all 47 species
Adi_g084299	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aev_g20170	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g17005	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g10001	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene02717.t1	Aspi01Gene02717	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0280.g062318	No alias	not classified & original description: CDS=377-1795	0.04	OrthoFinder output from all 47 species
Cba_g16541	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Cba_g27570	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g73343	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.09G061800.1	Ceric.09G061800	not classified & original description: pacid=50587848...	0.06	OrthoFinder output from all 47 species
Ceric.1Z182300.1	Ceric.1Z182300	not classified & original description: pacid=50576865...	0.04	OrthoFinder output from all 47 species
Ceric.21G046500.1	Ceric.21G046500	not classified & original description: pacid=50603415...	0.04	OrthoFinder output from all 47 species
Dac_g16551	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g35636	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g11259	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g12009	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g05625	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g06829	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g11993	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g14959	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g15308	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01006653001	No alias	No description available	0.03	OrthoFinder output from all 47 species
GSVIVT01007693001	No alias	No description available	0.04	OrthoFinder output from all 47 species
GSVIVT01026339001	No alias	No description available	0.06	OrthoFinder output from all 47 species
LOC_Os01g07570.1	LOC_Os01g07570	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os01g36660.1	LOC_Os01g36660	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os03g59240.1	LOC_Os03g59240	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
LOC_Os05g07764.2	LOC_Os05g07764	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
LOC_Os07g10530.1	LOC_Os07g10530	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
LOC_Os07g38590.1	LOC_Os07g38590	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Len_g13261	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
MA_1134g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Msp_g15033	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g04366	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g13484	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g55490	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g13744	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g02975	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ppi_g05119	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0187.g025098	No alias	not classified & original description: CDS=473-1768	0.02	OrthoFinder output from all 47 species
Sam_g16338	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g38438	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g52777	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g005550.3.1	Solyc01g005550	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Solyc03g112620.4.1	Solyc03g112620	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Solyc05g005010.3.1	Solyc05g005010	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species
Solyc06g071590.3.1	Solyc06g071590	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Spa_g38129	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Tin_g14079	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e006081_P001	Zm00001e006081	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species
Zm00001e016772_P001	Zm00001e016772	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Zm00001e020747_P001	Zm00001e020747	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Zm00001e033077_P002	Zm00001e033077	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009736	cytokinin-activated signaling pathway	RCA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010410	hemicellulose metabolic process	None	Extended
BP	GO:0010413	glucuronoxylan metabolic process	RCA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044038	cell wall macromolecule biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0045491	xylan metabolic process	None	Extended
BP	GO:0045492	xylan biosynthetic process	RCA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070589	cellular component macromolecule biosynthetic process	None	Extended
BP	GO:0070592	cell wall polysaccharide biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0003002	regionalization	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005516	calmodulin binding	IEP	HCCA
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	HCCA
BP	GO:0006576	biogenic amine metabolic process	IEP	HCCA
BP	GO:0006595	polyamine metabolic process	IEP	HCCA
BP	GO:0006598	polyamine catabolic process	IEP	HCCA
BP	GO:0007166	cell surface receptor signaling pathway	IEP	HCCA
BP	GO:0007167	enzyme-linked receptor protein signaling pathway	IEP	HCCA
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	HCCA
BP	GO:0007346	regulation of mitotic cell cycle	IEP	HCCA
BP	GO:0008356	asymmetric cell division	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
BP	GO:0009310	amine catabolic process	IEP	HCCA
BP	GO:0009698	phenylpropanoid metabolic process	IEP	HCCA
BP	GO:0009845	seed germination	IEP	HCCA
BP	GO:0009956	radial pattern formation	IEP	HCCA
BP	GO:0032350	regulation of hormone metabolic process	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0042398	cellular modified amino acid biosynthetic process	IEP	HCCA
BP	GO:0042402	cellular biogenic amine catabolic process	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0045786	negative regulation of cell cycle	IEP	HCCA
BP	GO:0045930	negative regulation of mitotic cell cycle	IEP	HCCA
BP	GO:0048366	leaf development	IEP	HCCA
BP	GO:0048878	chemical homeostasis	IEP	HCCA
BP	GO:0050801	monoatomic ion homeostasis	IEP	HCCA
BP	GO:0051301	cell division	IEP	HCCA
BP	GO:0055065	metal ion homeostasis	IEP	HCCA
BP	GO:0055072	iron ion homeostasis	IEP	HCCA
BP	GO:0055076	transition metal ion homeostasis	IEP	HCCA
BP	GO:0055080	monoatomic cation homeostasis	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
BP	GO:0098771	inorganic ion homeostasis	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR025521	Neprosin_propep	117	223
IPR004314	Neprosin	236	458

External Links

No external refs found!

AT1G70550

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation