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  5. AT1G74230

AT1G74230 (GR-RBP5)


Aliases : GR-RBP5

Description : glycine-rich RNA-binding protein 5


Gene families : OG0000073 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000073_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G74230

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00251200 evm_27.TU.AmTr_v1... Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00030p00132070 ATRZ-1A,... Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
AMTR_s00114p00125610 evm_27.TU.AmTr_v1... Small RNA-binding protein 11, chloroplastic... 0.01 OrthoFinder output from all 47 species
AMTR_s00154p00024620 GR-RBP3,... RNA processing.organelle machineries.RNA... 0.01 OrthoFinder output from all 47 species
AT5G04280 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.05 OrthoFinder output from all 47 species
Adi_g043929 CCR2, ATGRP7,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g058531 No alias RNA chaperone *(RZ1) & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g108265 No alias RNA chaperone *(RZ1) & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g111293 CCR2, ATGRP7,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g01618 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g11980 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27510 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g47193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27876.t1 Aspi01Gene27876 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene51438.t1 GRP2, ATGRP2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene52246.t1 Aspi01Gene52246 RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0048.g030451 No alias not classified & original description: CDS=165-734 0.03 OrthoFinder output from all 47 species
Azfi_s0051.g031431 No alias not classified & original description: CDS=96-782 0.02 OrthoFinder output from all 47 species
Azfi_s0232.g059291 GRP2, ATGRP2, GR-RBP2 not classified & original description: CDS=1-585 0.02 OrthoFinder output from all 47 species
Cba_g14006 ATRZ-1A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G037800.1 GR-RBP4, GRP4,... not classified & original description: pacid=50619932... 0.03 OrthoFinder output from all 47 species
Ceric.30G044500.1 Ceric.30G044500 RNA chaperone *(RZ1) & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g03121 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g12830 No alias RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16014 GR-RBP4, GRP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021024001 GRP2, ATGRP2, GR-RBP2 RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
Gb_26296 GR-RBP3 RNA editing factor (ORRM) 0.06 OrthoFinder output from all 47 species
Gb_40269 No alias RNA chaperone (RZ1|GR-RBP) 0.08 OrthoFinder output from all 47 species
LOC_Os03g46770.1 CCR2, ATGRP7,... RNA chaperone (RZ1|GR-RBP) 0.02 OrthoFinder output from all 47 species
LOC_Os10g17454.1 GR-RBP3, LOC_Os10g17454 RNA editing factor (ORRM) 0.02 OrthoFinder output from all 47 species
Lfl_g05878 GRP2, ATGRP2, GR-RBP2 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g24303 CCR2, ATGRP7,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_168323g0010 No alias RNA chaperone (RZ1|GR-RBP) 0.03 OrthoFinder output from all 47 species
Ore_g13749 CCR2, ATGRP7,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12375 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.01 OrthoFinder output from all 47 species
Pnu_g10142 ATRZ-1A RNA chaperone *(RZ1) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c12_23410V3.1 GRP2, ATGRP2,... glycine-rich RNA-binding protein 3 0.02 OrthoFinder output from all 47 species
Pp3c12_23420V3.1 GRP2, ATGRP2,... glycine-rich RNA-binding protein 3 0.03 OrthoFinder output from all 47 species
Pp3c7_3360V3.1 CCR1, GR-RBP8,... cold, circadian rhythm, and RNA binding 1 0.09 OrthoFinder output from all 47 species
Ppi_g41843 GR-RBP4, GRP4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g50550 GR-RBP4, GRP4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g104840.4.1 ATRZ-1A, Solyc01g104840 RNA chaperone (RZ1|GR-RBP) 0.06 OrthoFinder output from all 47 species
Solyc02g066930.3.1 GR-RBP3, Solyc02g066930 RNA editing factor (ORRM) 0.03 OrthoFinder output from all 47 species
Solyc10g081180.2.1 GR-RBP3, Solyc10g081180 RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) 0.03 OrthoFinder output from all 47 species
Solyc11g008210.3.1 Solyc11g008210 Glycine-rich RNA-binding protein RZ1B OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Spa_g12968 GR-RBP4, GRP4 RNA editing factor *(ORRM3) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g43405 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g00653 GR-RBP5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g27808 GR-RBP4, GRP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e028481_P002 GRP2, ATGRP2,... RNA chaperone (RZ1|GR-RBP). RNA editing factor (ORRM) 0.02 OrthoFinder output from all 47 species
Zm00001e033010_P001 Zm00001e033010 RNA chaperone (RZ1|GR-RBP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IDA Interproscan
MF GO:0003723 RNA binding ISS Interproscan
MF GO:0005507 copper ion binding IDA Interproscan
MF GO:0005524 ATP binding IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0010228 vegetative to reproductive phase transition of meristem RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006996 organelle organization IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009631 cold acclimation IEP HCCA
BP GO:0032392 DNA geometric change IEP HCCA
BP GO:0032508 DNA duplex unwinding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 36 105
No external refs found!