AT1G74840

Description : Homeodomain-like superfamily protein

Gene families : OG0000160 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G74840

Target	Alias	Description	ECC score	Gene Family Method
AT1G70000	No alias	myb-like transcription factor family protein	0.03	OrthoFinder output from all 47 species
AT5G01200	No alias	Duplicated homeodomain-like superfamily protein	0.04	OrthoFinder output from all 47 species
AT5G04760	No alias	Duplicated homeodomain-like superfamily protein	0.03	OrthoFinder output from all 47 species
AT5G56840	No alias	myb-like transcription factor family protein	0.04	OrthoFinder output from all 47 species
Adi_g004593	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g012577	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Adi_g013787	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g021554	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Adi_g075106	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g03908	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Aev_g24499	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Ala_g01356	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Als_g49186	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Aob_g22310	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.01	OrthoFinder output from all 47 species
Aop_g13795	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene17159.t1	Aspi01Gene17159	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene72735.t1	Aspi01Gene72735	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0084.g038982	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Cba_g29246	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Cba_g29990	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.05	OrthoFinder output from all 47 species
Cba_g68518	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Ceric.22G032800.1	Ceric.22G032800	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Ceric.30G065000.1	Ceric.30G065000	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Dac_g03644	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g03859	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.01	OrthoFinder output from all 47 species
Dde_g25023	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Ehy_g12105	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.04	OrthoFinder output from all 47 species
GSVIVT01013871001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.05	OrthoFinder output from all 47 species
GSVIVT01016370001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.05	OrthoFinder output from all 47 species
GSVIVT01016996001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.04	OrthoFinder output from all 47 species
GSVIVT01020132001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.04	OrthoFinder output from all 47 species
GSVIVT01024794001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.04	OrthoFinder output from all 47 species
GSVIVT01036090001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.04	OrthoFinder output from all 47 species
Gb_28483	No alias	transcription factor (MYB-related)	0.02	OrthoFinder output from all 47 species
LOC_Os01g04930.1	LOC_Os01g04930	transcription factor (MYB-related)	0.05	OrthoFinder output from all 47 species
LOC_Os01g09280.1	LOC_Os01g09280	transcription factor (MYB-related)	0.03	OrthoFinder output from all 47 species
LOC_Os01g64360.1	LOC_Os01g64360	transcription factor (MYB-related)	0.04	OrthoFinder output from all 47 species
LOC_Os05g37060.1	LOC_Os05g37060	transcription factor (MYB-related)	0.05	OrthoFinder output from all 47 species
LOC_Os05g37730.1	LOC_Os05g37730	transcription factor (MYB-related)	0.06	OrthoFinder output from all 47 species
LOC_Os10g41200.1	LOC_Os10g41200	transcription factor (MYB-related)	0.02	OrthoFinder output from all 47 species
Len_g31113	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Len_g41469	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Len_g49396	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
MA_11322g0010	No alias	transcription factor (MYB-related)	0.02	OrthoFinder output from all 47 species
MA_41803g0010	No alias	transcription factor (MYB-related)	0.03	OrthoFinder output from all 47 species
MA_908g0010	No alias	transcription factor (MYB-related)	0.02	OrthoFinder output from all 47 species
Msp_g03909	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.01	OrthoFinder output from all 47 species
Msp_g35415	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Pir_g22023	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.04	OrthoFinder output from all 47 species
Pir_g26062	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.03	OrthoFinder output from all 47 species
Pir_g63199	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Pnu_g26665	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Solyc04g008870.3.1	Solyc04g008870	transcription factor (MYB-related)	0.03	OrthoFinder output from all 47 species
Solyc07g026680.2.1	Solyc07g026680	transcription factor (MYB-related)	0.01	OrthoFinder output from all 47 species
Solyc09g014250.3.1	Solyc09g014250	transcription factor (MYB-related)	0.04	OrthoFinder output from all 47 species
Spa_g04347	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Spa_g15891	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Tin_g06825	No alias	MYB-RELATED transcription factor *(MYB-R-R) & original...	0.02	OrthoFinder output from all 47 species
Tin_g40900	No alias	subgroup ERF-X transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e002368_P001	Zm00001e002368	transcription factor (MYB-related)	0.04	OrthoFinder output from all 47 species
Zm00001e019254_P001	Zm00001e019254	transcription factor (MYB-related)	0.03	OrthoFinder output from all 47 species
Zm00001e020633_P001	Zm00001e020633	transcription factor (MYB-related)	0.02	OrthoFinder output from all 47 species
Zm00001e025783_P002	Zm00001e025783	transcription factor (MYB-related)	0.03	OrthoFinder output from all 47 species
Zm00001e027835_P005	Zm00001e027835	transcription factor (MYB-related)	0.04	OrthoFinder output from all 47 species
Zm00001e028675_P001	Zm00001e028675	transcription factor (MYB-related)	0.03	OrthoFinder output from all 47 species
Zm00001e031738_P001	Zm00001e031738	transcription factor (MYB-related)	0.04	OrthoFinder output from all 47 species
Zm00001e031755_P001	Zm00001e031755	transcription factor (MYB-related)	0.04	OrthoFinder output from all 47 species
Zm00001e040277_P001	Zm00001e040277	transcription factor (MYB-related)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0002682	regulation of immune system process	None	Extended
BP	GO:0002831	regulation of response to biotic stimulus	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006612	protein targeting to membrane	RCA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IEP	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009723	response to ethylene	IEP	Interproscan
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IEP	Interproscan
BP	GO:0009737	response to abscisic acid	IEP	Interproscan
BP	GO:0009739	response to gibberellin	IEP	Interproscan
BP	GO:0009751	response to salicylic acid	IEP	Interproscan
BP	GO:0009753	response to jasmonic acid	IEP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009962	regulation of flavonoid biosynthetic process	None	Extended
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010363	regulation of plant-type hypersensitive response	RCA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010941	regulation of cell death	None	Extended
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031347	regulation of defense response	None	Extended
BP	GO:0032101	regulation of response to external stimulus	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043067	regulation of programmed cell death	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	None	Extended
BP	GO:0045088	regulation of innate immune response	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046686	response to cadmium ion	IEP	Interproscan
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0050776	regulation of immune response	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0051668	localization within membrane	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070542	response to fatty acid	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0072657	protein localization to membrane	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080134	regulation of response to stress	None	Extended
BP	GO:0080135	regulation of cellular response to stress	None	Extended
BP	GO:0090150	establishment of protein localization to membrane	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0097305	response to alcohol	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0000902	cell morphogenesis	IEP	HCCA
BP	GO:0000904	cell morphogenesis involved in differentiation	IEP	HCCA
BP	GO:0002237	response to molecule of bacterial origin	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004683	calmodulin-dependent protein kinase activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
MF	GO:0005200	structural constituent of cytoskeleton	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
BP	GO:0006094	gluconeogenesis	IEP	HCCA
BP	GO:0006468	protein phosphorylation	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006816	calcium ion transport	IEP	HCCA
BP	GO:0006833	water transport	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0007033	vacuole organization	IEP	HCCA
BP	GO:0007166	cell surface receptor signaling pathway	IEP	HCCA
BP	GO:0007167	enzyme-linked receptor protein signaling pathway	IEP	HCCA
BP	GO:0007169	transmembrane receptor protein tyrosine kinase signaling pathway	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009612	response to mechanical stimulus	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
BP	GO:0009741	response to brassinosteroid	IEP	HCCA
BP	GO:0009750	response to fructose	IEP	HCCA
BP	GO:0009825	multidimensional cell growth	IEP	HCCA
BP	GO:0009826	unidimensional cell growth	IEP	HCCA
BP	GO:0009932	cell tip growth	IEP	HCCA
BP	GO:0010065	primary meristem tissue development	IEP	HCCA
BP	GO:0010067	procambium histogenesis	IEP	HCCA
BP	GO:0010103	stomatal complex morphogenesis	IEP	HCCA
BP	GO:0010114	response to red light	IEP	HCCA
BP	GO:0010193	response to ozone	IEP	HCCA
BP	GO:0010218	response to far red light	IEP	HCCA
BP	GO:0010498	proteasomal protein catabolic process	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0016049	cell growth	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
BP	GO:0016310	phosphorylation	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
BP	GO:0019319	hexose biosynthetic process	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0019722	calcium-mediated signaling	IEP	HCCA
BP	GO:0019932	second-messenger-mediated signaling	IEP	HCCA
BP	GO:0030163	protein catabolic process	IEP	HCCA
BP	GO:0030243	cellulose metabolic process	IEP	HCCA
BP	GO:0030244	cellulose biosynthetic process	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0040007	growth	IEP	HCCA
BP	GO:0042044	fluid transport	IEP	HCCA
BP	GO:0043170	macromolecule metabolic process	IEP	HCCA
BP	GO:0043473	pigmentation	IEP	HCCA
BP	GO:0043476	pigment accumulation	IEP	HCCA
BP	GO:0043478	pigment accumulation in response to UV light	IEP	HCCA
BP	GO:0043479	pigment accumulation in tissues in response to UV light	IEP	HCCA
BP	GO:0043480	pigment accumulation in tissues	IEP	HCCA
BP	GO:0043481	anthocyanin accumulation in tissues in response to UV light	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
BP	GO:0046364	monosaccharide biosynthetic process	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0048443	stamen development	IEP	HCCA
BP	GO:0048469	cell maturation	IEP	HCCA
BP	GO:0048507	meristem development	IEP	HCCA
BP	GO:0048508	embryonic meristem development	IEP	HCCA
BP	GO:0048589	developmental growth	IEP	HCCA
BP	GO:0048764	trichoblast maturation	IEP	HCCA
BP	GO:0048765	root hair cell differentiation	IEP	HCCA
BP	GO:0048768	root hair cell tip growth	IEP	HCCA
BP	GO:0051273	beta-glucan metabolic process	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	HCCA
BP	GO:0090626	plant epidermis morphogenesis	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901565	organonitrogen compound catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	97	141

External Links

No external refs found!

AT1G74840

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation