1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G77570

AT1G77570


Description : Winged helix-turn-helix transcription repressor DNA-binding


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G77570

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00068180 AT-HSFB2A,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.01 OrthoFinder output from all 47 species
AMTR_s00132p00118400 HSF4, HSFB1,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
AT2G41690 AT-HSFB3, HSFB3 heat shock transcription factor B3 0.06 OrthoFinder output from all 47 species
AT4G18870 No alias E2F/DP family winged-helix DNA-binding domain 0.01 OrthoFinder output from all 47 species
AT4G36990 HSF4, HSFB1,... heat shock factor 4 0.03 OrthoFinder output from all 47 species
Aev_g05464 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13109 ATHSF1, HSF1,... transcriptional regulator *(HsfA1) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52565 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32376 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0065.g035749 ATHSF1, HSF1,... HSF-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Azfi_s0672.g081792 HSF4, HSFB1,... HSF-type transcription factor & original description: CDS=1-651 0.02 OrthoFinder output from all 47 species
Dac_g20880 AT-HSFA6B, HSFA6B not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g04697 HSF4, HSFB1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10301 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
LOC_Os09g28354.1 HSF4, HSFB1,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Len_g28547 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11876 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g62261 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30272 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g35931 HSFA1E, ATHSFA1E HSF-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Smo92634 HSFB4, SCZ, AT-HSFB4 RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
Zm00001e009909_P001 HSFB4, SCZ,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 27 116
No external refs found!