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AT1G78160 (PUM7, APUM7)


Aliases : PUM7, APUM7

Description : pumilio 7


Gene families : OG0000858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000858_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G78160

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0090.g042709 APUM12, PUM12 not classified & original description: CDS=250-2769 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
MF GO:0003729 mRNA binding IPI Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006360 transcription by RNA polymerase I IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR001313 Pumilio_RNA-bd_rpt 484 512
IPR001313 Pumilio_RNA-bd_rpt 447 479
IPR001313 Pumilio_RNA-bd_rpt 334 367
IPR001313 Pumilio_RNA-bd_rpt 370 403
No external refs found!