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  5. AT1G78290

AT1G78290


No description available


Gene families : OG0000299 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000299_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G78290
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Adi_g058919 SRK2E, ATOST1,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Aspi01Gene48563.t1 SRK2E, ATOST1,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Aspi01Gene70135.t1 SRK2E, ATOST1,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Azfi_s0467.g072835 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Ceric.18G050300.1 SRK2E, ATOST1,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
LOC_Os02g34600.1 SNRK2.4, ASK1,... SNF1-related protein kinase (SnRK2) 0.03 OrthoFinder output from all 47 species
Len_g13128 SRK2E, ATOST1,... EC_2.7 transferase transferring phosphorus-containing... 0.02 OrthoFinder output from all 47 species
Msp_g26240 SRK2E, ATOST1,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Nbi_g05729 SNRK2-3, SNRK2.3, SRK2I EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Pir_g53011 SRK2E, ATOST1,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Tin_g06520 SRK2E, ATOST1,... EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Zm00001e042001_P001 SRK2H, SNRK2-5,... SNF1-related protein kinase (SnRK2) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
BP GO:0006970 response to osmotic stress IGI Interproscan
MF GO:0016301 kinase activity ISS Interproscan
BP GO:0080167 response to karrikin IEP Interproscan
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Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
CC GO:0000813 ESCRT I complex IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0001708 cell fate specification IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003713 transcription coactivator activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004520 endodeoxyribonuclease activity IEP HCCA
MF GO:0004536 deoxyribonuclease activity IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005769 early endosome IEP HCCA
CC GO:0005770 late endosome IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006266 DNA ligation IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006294 nucleotide-excision repair, preincision complex assembly IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009957 epidermal cell fate specification IEP HCCA
BP GO:0010026 trichome differentiation IEP HCCA
BP GO:0010091 trichome branching IEP HCCA
BP GO:0010212 response to ionizing radiation IEP HCCA
BP GO:0010213 non-photoreactive DNA repair IEP HCCA
BP GO:0010332 response to gamma radiation IEP HCCA
MF GO:0010385 double-stranded methylated DNA binding IEP HCCA
BP GO:0010562 positive regulation of phosphorus metabolic process IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0010922 positive regulation of phosphatase activity IEP HCCA
BP GO:0016049 cell growth IEP HCCA
MF GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0017108 5'-flap endonuclease activity IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
BP GO:0032880 regulation of protein localization IEP HCCA
BP GO:0035306 positive regulation of dephosphorylation IEP HCCA
BP GO:0035510 DNA dealkylation IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0040007 growth IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0045165 cell fate commitment IEP HCCA
BP GO:0045937 positive regulation of phosphate metabolic process IEP HCCA
MF GO:0048256 flap endonuclease activity IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0051345 positive regulation of hydrolase activity IEP HCCA
BP GO:0060341 regulation of cellular localization IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070988 demethylation IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0080111 DNA demethylation IEP HCCA
BP GO:1901968 regulation of polynucleotide 3'-phosphatase activity IEP HCCA
BP GO:1901969 positive regulation of polynucleotide 3'-phosphatase activity IEP HCCA
BP GO:1901971 regulation of DNA-5-methylcytosine glycosylase activity IEP HCCA
BP GO:1901972 positive regulation of DNA-5-methylcytosine glycosylase activity IEP HCCA
BP GO:1902544 regulation of DNA N-glycosylase activity IEP HCCA
BP GO:1902546 positive regulation of DNA N-glycosylase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!