Aliases : IDD4, AtIDD4
Description : indeterminate(ID)-domain 4
Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT2G02080 | |
| Cluster | HCCA: Cluster_63 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00024p00098860 | IDD14, AtIDD14,... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g099246 | NUC | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g18228 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g03571 | MGP | C2H2 subclass IDD transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g13410 | IDD16, AtIDD16 | C2H2 subclass IDD transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene21463.t1 | IDD2, AtIDD2,... | C2H2 subclass IDD transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0004.g008481 | IDD16, AtIDD16 | C2H2 subclass IDD transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0223.g058834 | IDD2, AtIDD2 | C2H2 subclass IDD transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g07681 | MGP | C2H2 subclass IDD transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g24855 | No alias | component *(MED19) of head module of MEDIATOR... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01025658001 | JKD | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g45054.1 | AtIDD12, IDD12,... | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g44050.1 | IDD4, AtIDD4,... | C2H2 zinc finger transcription factor | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g30618 | MGP | C2H2 subclass IDD transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Mp1g15660.1 | IDD16, AtIDD16 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g24448 | IDD2, AtIDD2 | C2H2 subclass IDD transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g20981 | IDD14, AtIDD14 | C2H2 subclass IDD transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e016559_P001 | AtIDD7, IDD7,... | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e034898_P001 | IDD4, AtIDD4,... | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | ISS | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000813 | ESCRT I complex | IEP | HCCA |
| MF | GO:0003690 | double-stranded DNA binding | IEP | HCCA |
| MF | GO:0003712 | transcription coregulator activity | IEP | HCCA |
| MF | GO:0003713 | transcription coactivator activity | IEP | HCCA |
| MF | GO:0005351 | carbohydrate:proton symporter activity | IEP | HCCA |
| MF | GO:0005402 | carbohydrate:monoatomic cation symporter activity | IEP | HCCA |
| CC | GO:0005622 | intracellular anatomical structure | IEP | HCCA |
| CC | GO:0005769 | early endosome | IEP | HCCA |
| CC | GO:0005770 | late endosome | IEP | HCCA |
| BP | GO:0006266 | DNA ligation | IEP | HCCA |
| BP | GO:0010091 | trichome branching | IEP | HCCA |
| MF | GO:0010385 | double-stranded methylated DNA binding | IEP | HCCA |
| BP | GO:0010562 | positive regulation of phosphorus metabolic process | IEP | HCCA |
| BP | GO:0010921 | regulation of phosphatase activity | IEP | HCCA |
| BP | GO:0010922 | positive regulation of phosphatase activity | IEP | HCCA |
| MF | GO:0015144 | carbohydrate transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015293 | symporter activity | IEP | HCCA |
| MF | GO:0015294 | solute:monoatomic cation symporter activity | IEP | HCCA |
| MF | GO:0015295 | solute:proton symporter activity | IEP | HCCA |
| MF | GO:0032182 | ubiquitin-like protein binding | IEP | HCCA |
| BP | GO:0035306 | positive regulation of dephosphorylation | IEP | HCCA |
| BP | GO:0035510 | DNA dealkylation | IEP | HCCA |
| CC | GO:0036452 | ESCRT complex | IEP | HCCA |
| BP | GO:0043085 | positive regulation of catalytic activity | IEP | HCCA |
| MF | GO:0043130 | ubiquitin binding | IEP | HCCA |
| BP | GO:0044093 | positive regulation of molecular function | IEP | HCCA |
| BP | GO:0045937 | positive regulation of phosphate metabolic process | IEP | HCCA |
| BP | GO:0051301 | cell division | IEP | HCCA |
| BP | GO:0051336 | regulation of hydrolase activity | IEP | HCCA |
| BP | GO:0051345 | positive regulation of hydrolase activity | IEP | HCCA |
| BP | GO:0070988 | demethylation | IEP | HCCA |
| BP | GO:0080111 | DNA demethylation | IEP | HCCA |
| BP | GO:1901968 | regulation of polynucleotide 3'-phosphatase activity | IEP | HCCA |
| BP | GO:1901969 | positive regulation of polynucleotide 3'-phosphatase activity | IEP | HCCA |
| BP | GO:1901971 | regulation of DNA-5-methylcytosine glycosylase activity | IEP | HCCA |
| BP | GO:1901972 | positive regulation of DNA-5-methylcytosine glycosylase activity | IEP | HCCA |
| BP | GO:1902544 | regulation of DNA N-glycosylase activity | IEP | HCCA |
| BP | GO:1902546 | positive regulation of DNA N-glycosylase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022755 | Znf_C2H2_jaz | 83 | 105 |
| No external refs found! |
