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  5. AT2G03880

AT2G03880 (REME1)


Aliases : REME1

Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G03880

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00240190 evm_27.TU.AmTr_v1... Cell cycle.organelle machineries.DNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00039p00210570 EMB2758 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
AMTR_s00103p00160020 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein DOT4,... 0.06 OrthoFinder output from all 47 species
AMTR_s00170p00032020 OTP86,... Pentatricopeptide repeat-containing protein At5g16860... 0.05 OrthoFinder output from all 47 species
AT1G15510 VAC1, ECB2, ATECB2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G14730 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G52630 MEF1 mitochondrial RNAediting factor 1 0.05 OrthoFinder output from all 47 species
Adi_g095447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g36953 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37258 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g05931 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24083 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g27600 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g28207 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09609 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23959 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38034 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14876.t1 OTP80, Aspi01Gene14876 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene18568.t1 Aspi01Gene18568 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24967.t1 Aspi01Gene24967 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58744.t1 EMB2758, Aspi01Gene58744 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61045.t1 VAC1, ECB2,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07249 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07466 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07785 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g11529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20724 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29457 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45603 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67304 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.01G053600.1 Ceric.01G053600 not classified & original description: pacid=50592089... 0.05 OrthoFinder output from all 47 species
Ceric.11G086200.1 OTP84, Ceric.11G086200 not classified & original description: pacid=50595902... 0.03 OrthoFinder output from all 47 species
Ceric.13G082600.1 Ceric.13G082600 not classified & original description: pacid=50636923... 0.03 OrthoFinder output from all 47 species
Ceric.15G056400.1 Ceric.15G056400 not classified & original description: pacid=50639467... 0.04 OrthoFinder output from all 47 species
Ceric.26G072000.1 Ceric.26G072000 not classified & original description: pacid=50599752... 0.04 OrthoFinder output from all 47 species
Ceric.36G058400.1 Ceric.36G058400 not classified & original description: pacid=50568396... 0.06 OrthoFinder output from all 47 species
Dac_g02368 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g26939 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33196 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05649 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g05767 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07608 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08229 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16544 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16950 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g21476 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26576 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g35959 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36021 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38688 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40678 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g50140 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02296 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g04434 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23999 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26014 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g26440 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00984 OSB3 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.02 OrthoFinder output from all 47 species
Ehy_g18910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000072001 No alias Pentatricopeptide repeat-containing protein At3g05340... 0.04 OrthoFinder output from all 47 species
GSVIVT01003804001 CRR22 Pentatricopeptide repeat-containing protein At5g16860... 0.06 OrthoFinder output from all 47 species
GSVIVT01003957001 No alias Pentatricopeptide repeat-containing protein At5g65570... 0.04 OrthoFinder output from all 47 species
GSVIVT01007811001 No alias Pentatricopeptide repeat-containing protein At3g22690... 0.09 OrthoFinder output from all 47 species
GSVIVT01007974001 No alias Pentatricopeptide repeat-containing protein At5g61400... 0.06 OrthoFinder output from all 47 species
GSVIVT01008715001 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.05 OrthoFinder output from all 47 species
GSVIVT01008721001 No alias Pentatricopeptide repeat-containing protein At5g40410,... 0.05 OrthoFinder output from all 47 species
GSVIVT01008757001 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.07 OrthoFinder output from all 47 species
GSVIVT01010031001 No alias RNA processing.organelle machineries.RNA... 0.04 OrthoFinder output from all 47 species
GSVIVT01010647001 SLO1 Pentatricopeptide repeat-containing protein At2g22410,... 0.04 OrthoFinder output from all 47 species
GSVIVT01010654001 No alias Pentatricopeptide repeat-containing protein At4g38010... 0.04 OrthoFinder output from all 47 species
GSVIVT01011501001 No alias Pentatricopeptide repeat-containing protein At5g39350... 0.1 OrthoFinder output from all 47 species
GSVIVT01012938001 SLO1 Pentatricopeptide repeat-containing protein At2g29760,... 0.06 OrthoFinder output from all 47 species
GSVIVT01015087001 CRR2 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
GSVIVT01017763001 No alias Pentatricopeptide repeat-containing protein At4g15720... 0.04 OrthoFinder output from all 47 species
GSVIVT01018098001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
GSVIVT01019408001 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.05 OrthoFinder output from all 47 species
GSVIVT01021268001 No alias Pentatricopeptide repeat-containing protein At4g18840... 0.04 OrthoFinder output from all 47 species
GSVIVT01021774001 No alias Pentatricopeptide repeat-containing protein At4g20770... 0.07 OrthoFinder output from all 47 species
GSVIVT01023644001 No alias Pentatricopeptide repeat-containing protein At4g30700... 0.05 OrthoFinder output from all 47 species
GSVIVT01023860001 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.04 OrthoFinder output from all 47 species
GSVIVT01024061001 No alias Pentatricopeptide repeat-containing protein At2g21090... 0.05 OrthoFinder output from all 47 species
GSVIVT01024912001 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
GSVIVT01024915001 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
GSVIVT01026025001 No alias Pentatricopeptide repeat-containing protein At3g13880... 0.05 OrthoFinder output from all 47 species
GSVIVT01026141001 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.06 OrthoFinder output from all 47 species
GSVIVT01027504001 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
GSVIVT01028022001 No alias Pentatricopeptide repeat-containing protein At3g62890... 0.05 OrthoFinder output from all 47 species
GSVIVT01028819001 No alias Pentatricopeptide repeat-containing protein At5g52850,... 0.08 OrthoFinder output from all 47 species
GSVIVT01029347001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01029382001 No alias Putative pentatricopeptide repeat-containing protein... 0.08 OrthoFinder output from all 47 species
GSVIVT01030080001 No alias RNA processing.organelle machineries.RNA... 0.05 OrthoFinder output from all 47 species
GSVIVT01030248001 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
GSVIVT01031266001 No alias Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
GSVIVT01033304001 CRR28 Pentatricopeptide repeat-containing protein At2g02980,... 0.07 OrthoFinder output from all 47 species
GSVIVT01034655001 No alias Pentatricopeptide repeat-containing protein At5g04780,... 0.06 OrthoFinder output from all 47 species
GSVIVT01035837001 LPA66 Pentatricopeptide repeat-containing protein At4g21065... 0.04 OrthoFinder output from all 47 species
GSVIVT01036169001 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.07 OrthoFinder output from all 47 species
Gb_00194 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_00201 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_03136 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
Gb_05123 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 OrthoFinder output from all 47 species
Gb_07756 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
Gb_08569 OTP84 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_08863 CRR22 RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
Gb_09793 No alias RNA editing factor (MEF7) 0.03 OrthoFinder output from all 47 species
Gb_11667 CRR22 Pentatricopeptide repeat-containing protein At3g03580... 0.04 OrthoFinder output from all 47 species
Gb_16017 CRR22 RNA editing factor (MEF19) 0.04 OrthoFinder output from all 47 species
Gb_16515 No alias RNA editing factor (MEF11) 0.05 OrthoFinder output from all 47 species
Gb_16955 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_17734 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
Gb_18149 CRR2 OTP70 plastidial RNA splicing factor 0.03 OrthoFinder output from all 47 species
Gb_18788 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Gb_20774 CRR22 RNA editing factor (MEF19). RNA editing factor (OTP82) 0.06 OrthoFinder output from all 47 species
Gb_21055 OTP84 Pentatricopeptide repeat-containing protein DOT4,... 0.06 OrthoFinder output from all 47 species
Gb_26696 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_28038 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Gb_35645 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.05 OrthoFinder output from all 47 species
Gb_36398 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Gb_37176 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_37820 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Gb_38068 OTP86 RNA editing factor (OTP82) 0.05 OrthoFinder output from all 47 species
LOC_Os01g01115.1 LOC_Os01g01115 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os01g08120.1 OTP81, LOC_Os01g08120 RNA editing factor (OTP81) 0.05 OrthoFinder output from all 47 species
LOC_Os01g40720.1 LOC_Os01g40720 RNA editing factor (MEF7) 0.05 OrthoFinder output from all 47 species
LOC_Os01g60430.1 LOC_Os01g60430 RNA editing factor (MEF10) 0.07 OrthoFinder output from all 47 species
LOC_Os01g68490.1 MEF21, LOC_Os01g68490 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os03g13230.1 LOC_Os03g13230 Pentatricopeptide repeat-containing protein At4g37170... 0.03 OrthoFinder output from all 47 species
LOC_Os03g56850.1 LOC_Os03g56850 Pentatricopeptide repeat-containing protein At4g21300... 0.04 OrthoFinder output from all 47 species
LOC_Os03g60690.1 LPA66, LOC_Os03g60690 Pentatricopeptide repeat-containing protein At4g21065... 0.06 OrthoFinder output from all 47 species
LOC_Os03g63510.1 LOC_Os03g63510 Putative pentatricopeptide repeat-containing protein... 0.09 OrthoFinder output from all 47 species
LOC_Os04g58980.1 LOC_Os04g58980 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os05g05490.1 LOC_Os05g05490 Pentatricopeptide repeat-containing protein At3g05340... 0.05 OrthoFinder output from all 47 species
LOC_Os05g30710.1 LOC_Os05g30710 Pentatricopeptide repeat-containing protein At1g20230... 0.11 OrthoFinder output from all 47 species
LOC_Os06g12510.1 LOC_Os06g12510 Pentatricopeptide repeat-containing protein At5g15300... 0.09 OrthoFinder output from all 47 species
LOC_Os06g40860.1 LOC_Os06g40860 Pentatricopeptide repeat-containing protein At1g03540... 0.05 OrthoFinder output from all 47 species
LOC_Os06g49185.1 LOC_Os06g49185 Pentatricopeptide repeat-containing protein At3g03580... 0.05 OrthoFinder output from all 47 species
LOC_Os07g44299.1 OTP81, LOC_Os07g44299 Pentatricopeptide repeat-containing protein At2g29760,... 0.05 OrthoFinder output from all 47 species
LOC_Os07g47370.1 LOC_Os07g47370 Pentatricopeptide repeat-containing protein At4g32430,... 0.12 OrthoFinder output from all 47 species
LOC_Os08g04400.1 LOC_Os08g04400 Pentatricopeptide repeat-containing protein At5g50390,... 0.05 OrthoFinder output from all 47 species
LOC_Os08g39130.1 LOC_Os08g39130 Pentatricopeptide repeat-containing protein At2g29760,... 0.04 OrthoFinder output from all 47 species
LOC_Os09g15800.1 LOC_Os09g15800 Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
LOC_Os09g24640.1 REME1, LOC_Os09g24640 Pentatricopeptide repeat-containing protein At2g36730... 0.04 OrthoFinder output from all 47 species
LOC_Os11g01836.1 LOC_Os11g01836 Putative pentatricopeptide repeat-containing protein... 0.07 OrthoFinder output from all 47 species
LOC_Os11g14980.1 LOC_Os11g14980 Pentatricopeptide repeat-containing protein At4g21300... 0.06 OrthoFinder output from all 47 species
LOC_Os11g29360.1 OTP82, LOC_Os11g29360 Pentatricopeptide repeat-containing protein At5g66520... 0.05 OrthoFinder output from all 47 species
LOC_Os11g37330.2 LOI1, MEF11,... RNA editing factor (MEF11) 0.09 OrthoFinder output from all 47 species
LOC_Os12g01850.1 LOC_Os12g01850 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os12g06650.1 LOC_Os12g06650 Pentatricopeptide repeat-containing protein At4g15720... 0.05 OrthoFinder output from all 47 species
LOC_Os12g30620.1 LOC_Os12g30620 Pentatricopeptide repeat-containing protein At3g29230... 0.03 OrthoFinder output from all 47 species
Lfl_g17636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33253 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35930 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g36057 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_116442g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
MA_135424g0010 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
MA_482767g0010 OTP84 Pentatricopeptide repeat-containing protein At1g20230... 0.04 OrthoFinder output from all 47 species
MA_6329g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_66417g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
MA_904305g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_916566g0010 OTP82 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_9384g0020 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.04 OrthoFinder output from all 47 species
MA_9463538g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 OrthoFinder output from all 47 species
Msp_g41392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g21989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g41038 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05131 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06449 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g12341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22914 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43620 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g43675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13390 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07461 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07564 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17797 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18809 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31871 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g32088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32097 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53545 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53562 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013956 No alias not classified & original description: CDS=1-2181 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021137 No alias ssDNA-binding protein *(OSB) & original description: CDS=1-933 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023710 No alias not classified & original description: CDS=112-2235 0.02 OrthoFinder output from all 47 species
Sam_g08130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo34767 CRR2 Pentatricopeptide repeat-containing protein At4g14820... 0.03 OrthoFinder output from all 47 species
Smo462 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.04 OrthoFinder output from all 47 species
Smo61782 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Solyc01g006920.4.1 Solyc01g006920 Pentatricopeptide repeat-containing protein At4g39530... 0.1 OrthoFinder output from all 47 species
Solyc01g090510.2.1 Solyc01g090510 Putative pentatricopeptide repeat-containing protein... 0.07 OrthoFinder output from all 47 species
Solyc01g091610.1.1 Solyc01g091610 Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
Solyc02g014360.3.1 LOI1, MEF11,... RNA editing factor (MEF11) 0.04 OrthoFinder output from all 47 species
Solyc02g068630.1.1 Solyc02g068630 Putative pentatricopeptide repeat-containing protein... 0.07 OrthoFinder output from all 47 species
Solyc02g076700.1.1 Solyc02g076700 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Solyc02g088650.1.1 Solyc02g088650 Pentatricopeptide repeat-containing protein At5g39350... 0.05 OrthoFinder output from all 47 species
Solyc02g093380.1.1 Solyc02g093380 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Solyc03g006990.1.1 Solyc03g006990 Pentatricopeptide repeat-containing protein At5g66520... 0.05 OrthoFinder output from all 47 species
Solyc03g063690.1.1 MEF1, Solyc03g063690 RNA editing factor (MEF1) 0.07 OrthoFinder output from all 47 species
Solyc03g093630.3.1 CRR2, Solyc03g093630 Pentatricopeptide repeat-containing protein At2g27610... 0.08 OrthoFinder output from all 47 species
Solyc03g097850.1.1 Solyc03g097850 Pentatricopeptide repeat-containing protein At5g16860... 0.06 OrthoFinder output from all 47 species
Solyc03g114660.1.1 Solyc03g114660 Pentatricopeptide repeat-containing protein At1g18485... 0.04 OrthoFinder output from all 47 species
Solyc03g119120.3.1 Solyc03g119120 Pentatricopeptide repeat-containing protein At4g02750... 0.07 OrthoFinder output from all 47 species
Solyc04g009000.1.1 Solyc04g009000 RNA editing factor (SLO2) 0.05 OrthoFinder output from all 47 species
Solyc04g051480.1.1 OTP84, Solyc04g051480 Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Solyc04g063300.3.1 Solyc04g063300 Pentatricopeptide repeat-containing protein At3g26540... 0.1 OrthoFinder output from all 47 species
Solyc04g076330.3.1 CRR22, Solyc04g076330 Pentatricopeptide repeat-containing protein At2g29760,... 0.09 OrthoFinder output from all 47 species
Solyc05g009400.3.1 Solyc05g009400 Pentatricopeptide repeat-containing protein At3g29230... 0.1 OrthoFinder output from all 47 species
Solyc05g012630.2.1 Solyc05g012630 Putative pentatricopeptide repeat-containing protein... 0.08 OrthoFinder output from all 47 species
Solyc06g009500.1.1 Solyc06g009500 Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
Solyc06g048900.1.1 Solyc06g048900 Pentatricopeptide repeat-containing protein At2g40720... 0.06 OrthoFinder output from all 47 species
Solyc06g062610.2.1 Solyc06g062610 Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Solyc06g066080.1.1 OTP85, Solyc06g066080 Pentatricopeptide repeat-containing protein At4g21065... 0.08 OrthoFinder output from all 47 species
Solyc06g069700.4.1 Solyc06g069700 Pentatricopeptide repeat-containing protein At5g61400... 0.07 OrthoFinder output from all 47 species
Solyc06g082880.2.1 Solyc06g082880 RNA editing factor (MEF13) 0.08 OrthoFinder output from all 47 species
Solyc06g084580.1.1 Solyc06g084580 Pentatricopeptide repeat-containing protein At4g20770... 0.07 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Solyc07g042760.1.1 Solyc07g042760 Pentatricopeptide repeat-containing protein At4g31070,... 0.09 OrthoFinder output from all 47 species
Solyc07g055310.1.1 Solyc07g055310 Pentatricopeptide repeat-containing protein At2g41080... 0.05 OrthoFinder output from all 47 species
Solyc08g023640.1.1 Solyc08g023640 Pentatricopeptide repeat-containing protein At4g21065... 0.07 OrthoFinder output from all 47 species
Solyc09g007430.1.1 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.04 OrthoFinder output from all 47 species
Solyc09g009790.4.1 Solyc09g009790 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Solyc09g009950.4.1 Solyc09g009950 RNA editing factor (MEF10) 0.04 OrthoFinder output from all 47 species
Solyc09g059575.1.1 Solyc09g059575 Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Solyc09g065710.1.1 OTP86, Solyc09g065710 RNA editing factor (OTP86) 0.11 OrthoFinder output from all 47 species
Solyc11g005970.1.1 Solyc11g005970 Pentatricopeptide repeat-containing protein At3g24000,... 0.07 OrthoFinder output from all 47 species
Solyc11g006940.3.1 Solyc11g006940 component Sm-G of U1/U2/U4/U5-associated Sm accessory... 0.05 OrthoFinder output from all 47 species
Solyc11g007230.1.1 Solyc11g007230 Pentatricopeptide repeat-containing protein At3g53360,... 0.12 OrthoFinder output from all 47 species
Solyc11g008970.1.1 Solyc11g008970 Pentatricopeptide repeat-containing protein At4g39952,... 0.1 OrthoFinder output from all 47 species
Solyc11g017290.1.1 Solyc11g017290 Pentatricopeptide repeat-containing protein At1g31430... 0.07 OrthoFinder output from all 47 species
Solyc11g067210.1.1 Solyc11g067210 Pentatricopeptide repeat-containing protein At2g27610... 0.07 OrthoFinder output from all 47 species
Solyc12g096510.3.1 Solyc12g096510 Pentatricopeptide repeat-containing protein At5g66520... 0.05 OrthoFinder output from all 47 species
Solyc12g099620.1.1 Solyc12g099620 Pentatricopeptide repeat-containing protein At4g32430,... 0.06 OrthoFinder output from all 47 species
Spa_g12935 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g53279 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g04368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06491 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g23000 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g28890 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30250 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30384 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g34472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e001007_P001 Zm00001e001007 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e003562_P001 REME1, Zm00001e003562 Pentatricopeptide repeat-containing protein At2g03880,... 0.04 OrthoFinder output from all 47 species
Zm00001e011519_P001 Zm00001e011519 Pentatricopeptide repeat-containing protein At4g21065... 0.05 OrthoFinder output from all 47 species
Zm00001e011748_P001 LPA66, Zm00001e011748 Pentatricopeptide repeat-containing protein At4g21065... 0.05 OrthoFinder output from all 47 species
Zm00001e013232_P001 Zm00001e013232 Pentatricopeptide repeat-containing protein At2g36730... 0.04 OrthoFinder output from all 47 species
Zm00001e014549_P001 CRR22, Zm00001e014549 Pentatricopeptide repeat-containing protein At1g11290,... 0.07 OrthoFinder output from all 47 species
Zm00001e015358_P001 Zm00001e015358 Pentatricopeptide repeat-containing protein At5g39350... 0.04 OrthoFinder output from all 47 species
Zm00001e021380_P001 Zm00001e021380 Pentatricopeptide repeat-containing protein At3g12770... 0.06 OrthoFinder output from all 47 species
Zm00001e021453_P001 CRR28, Zm00001e021453 Pentatricopeptide repeat-containing protein At5g06540... 0.05 OrthoFinder output from all 47 species
Zm00001e022858_P001 Zm00001e022858 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Zm00001e027978_P001 MEF1, Zm00001e027978 RNA editing factor (MEF1) 0.04 OrthoFinder output from all 47 species
Zm00001e029119_P001 Zm00001e029119 Pentatricopeptide repeat-containing protein At2g33760... 0.03 OrthoFinder output from all 47 species
Zm00001e030887_P001 Zm00001e030887 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e033171_P001 Zm00001e033171 Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
Zm00001e035817_P001 Zm00001e035817 Pentatricopeptide repeat-containing protein At4g32430,... 0.03 OrthoFinder output from all 47 species
Zm00001e036301_P001 Zm00001e036301 Pentatricopeptide repeat-containing protein At4g30700... 0.04 OrthoFinder output from all 47 species
Zm00001e036537_P001 Zm00001e036537 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e037600_P001 Zm00001e037600 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e038919_P001 Zm00001e038919 Pentatricopeptide repeat-containing protein At5g15300... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IDA Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0009451 RNA modification IMP Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000959 mitochondrial RNA metabolic process IEP HCCA
MF GO:0008327 methyl-CpG binding IEP HCCA
CC GO:0010369 chromocenter IEP HCCA
CC GO:0010370 perinucleolar chromocenter IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0043621 protein self-association IEP HCCA
BP GO:0080156 mitochondrial mRNA modification IEP HCCA
BP GO:1900864 mitochondrial RNA modification IEP HCCA
InterPro domains Description Start Stop
IPR032867 DYW_dom 496 620
IPR002885 Pentatricopeptide_repeat 463 492
IPR002885 Pentatricopeptide_repeat 198 221
IPR002885 Pentatricopeptide_repeat 224 270
IPR002885 Pentatricopeptide_repeat 126 172
IPR002885 Pentatricopeptide_repeat 323 368
IPR002885 Pentatricopeptide_repeat 297 320
IPR002885 Pentatricopeptide_repeat 390 422
No external refs found!