AT2G04030 (EMB1956, Hsp88.1,...)

Aliases : EMB1956, Hsp88.1, HSP90.5, AtHsp90.5, CR88

Description : Chaperone protein htpG family protein

Gene families : OG0000167 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000167_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G04030

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00028p00187760	Hsp89.1,...	External stimuli response.temperature.Hsp...	0.1	OrthoFinder output from all 47 species
Adi_g008059	HSP81-2, ERD8,...	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g008060	HSP81-3,...	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g010368	EMB1956,...	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g015322	EMB1956,...	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g046541	HSP81-2, ERD8,...	chaperone *(Hsp90) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g046542	Hsp81.4, AtHsp90.4	chaperone *(Hsp90) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g066201	EMB1956,...	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Adi_g108744	EMB1956,...	chaperone *(Hsp90) & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g14374	EMB1956,...	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g19233	EMB1956,...	chaperone *(Hsp90) & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g24090	EMB1956,...	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g27189	EMB1956,...	chaperone *(Hsp90) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g30385	EMB1956,...	chaperone *(Hsp90) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.17G075400.1	EMB1956,...	chaperone *(Hsp90) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.24G014100.1	EMB1956,...	chaperone *(Hsp90) & original description:...	0.06	OrthoFinder output from all 47 species
Ceric.27G012500.1	EMB1956,...	chaperone *(Hsp90) & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.31G021500.1	EMB1956,...	chaperone *(Hsp90) & original description:...	0.08	OrthoFinder output from all 47 species
Ceric.32G055000.1	AtHsp90.7,...	chaperone *(Hsp90) & original description:...	0.03	OrthoFinder output from all 47 species
Cre02.g080650	AtHsp90.7,...	External stimuli response.temperature.Hsp...	0.02	OrthoFinder output from all 47 species
Cre12.g514850	EMB1956,...	External stimuli response.temperature.Hsp...	0.04	OrthoFinder output from all 47 species
Dac_g01022	EMB1956,...	chaperone *(Hsp90) & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g13039	EMB1956,...	chaperone *(Hsp90) & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g04900	EMB1956,...	chaperone *(Hsp90) & original description: none	0.07	OrthoFinder output from all 47 species
Dcu_g08182	HSP81-3,...	chaperone *(Hsp90) & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g13979	EMB1956,...	chaperone *(Hsp90) & original description: none	0.07	OrthoFinder output from all 47 species
Dcu_g23792	HSP81-3,...	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g48899	HSP81-3,...	chaperone *(Hsp90) & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g06194	EMB1956,...	chaperone *(Hsp90) & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g11580	EMB1956,...	chaperone *(Hsp90) & original description: none	0.06	OrthoFinder output from all 47 species
Dde_g12217	EMB1956,...	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g16624	HSP81-3,...	chaperone *(Hsp90) & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g08592	EMB1956,...	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01010120001	EMB1956,...	External stimuli response.temperature.Hsp...	0.23	OrthoFinder output from all 47 species
GSVIVT01030056001	Hsp89.1,...	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
Gb_17770	EMB1956,...	chaperone (Hsp90)	0.03	OrthoFinder output from all 47 species
LOC_Os09g29840.1	EMB1956,...	chaperone (Hsp90)	0.08	OrthoFinder output from all 47 species
Len_g05437	EMB1956,...	chaperone *(Hsp90) & original description: none	0.07	OrthoFinder output from all 47 species
Len_g19155	EMB1956,...	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
MA_10343357g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_10431031g0010	AtHsp90.7,...	chaperone (Hsp90)	0.03	OrthoFinder output from all 47 species
MA_10431770g0010	EMB1956,...	chaperone (Hsp90)	0.07	OrthoFinder output from all 47 species
Mp5g15940.1	EMB1956,...	chaperone (Hsp90)	0.02	OrthoFinder output from all 47 species
Msp_g07506	EMB1956,...	chaperone *(Hsp90) & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g15641	EMB1956,...	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g10130	EMB1956,...	chaperone *(Hsp90) & original description: none	0.05	OrthoFinder output from all 47 species
Nbi_g13650	EMB1956,...	chaperone *(Hsp90) & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g11785	EMB1956,...	chaperone *(Hsp90) & original description: none	0.05	OrthoFinder output from all 47 species
Pir_g60193	EMB1956,...	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
Pp3c4_810V3.1	EMB1956,...	Chaperone protein htpG family protein	0.02	OrthoFinder output from all 47 species
Ppi_g10474	EMB1956,...	chaperone *(Hsp90) & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g14700	EMB1956,...	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g30936	EMB1956,...	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g002002	EMB1956,...	chaperone *(Hsp90) & original description: CDS=1-2544	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010902	EMB1956,...	chaperone *(Hsp90) & original description: CDS=65-2440	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013063	EMB1956,...	chaperone *(Hsp90) & original description: CDS=311-3004	0.03	OrthoFinder output from all 47 species
Sam_g02162	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g07952	No alias	chaperone *(Hsp90) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g11245	No alias	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g13643	No alias	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g23579	No alias	chaperone *(Hsp90) & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g28566	No alias	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g39200	No alias	chaperone *(Hsp90) & original description: none	0.04	OrthoFinder output from all 47 species
Smo267300	HSP81-3,...	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
Smo271484	HSP81-3,...	External stimuli response.temperature.Hsp...	0.04	OrthoFinder output from all 47 species
Smo88538	EMB1956,...	External stimuli response.temperature.Hsp...	0.03	OrthoFinder output from all 47 species
Solyc05g010670.3.1	EMB1956,...	chaperone (Hsp90)	0.12	OrthoFinder output from all 47 species
Solyc07g047790.3.1	Hsp89.1,...	chaperone (Hsp90)	0.03	OrthoFinder output from all 47 species
Spa_g08989	EMB1956,...	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g21689	HSP81-3,...	chaperone *(Hsp90) & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g22958	EMB1956,...	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g37505	EMB1956,...	chaperone *(Hsp90) & original description: none	0.09	OrthoFinder output from all 47 species
Spa_g50531	Hsp81.4, AtHsp90.4	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g57458	Hsp81.4, AtHsp90.4	chaperone *(Hsp90) & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g04141	EMB1956,...	chaperone *(Hsp90) & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g05617	EMB1956,...	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g17312	EMB1956,...	chaperone *(Hsp90) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e024327_P001	EMB1956,...	chaperone (Hsp90)	0.15	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IDA	Interproscan
MF	GO:0005524	ATP binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	IDA	Interproscan
CC	GO:0005774	vacuolar membrane	IDA	Interproscan
BP	GO:0006457	protein folding	ISS	Interproscan
BP	GO:0006605	protein targeting	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	None	Extended
BP	GO:0006996	organelle organization	None	Extended
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009408	response to heat	IEP	Interproscan
BP	GO:0009414	response to water deprivation	IMP	Interproscan
BP	GO:0009415	response to water	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009536	plastid	IDA	Interproscan
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009651	response to salt stress	IMP	Interproscan
BP	GO:0009657	plastid organization	None	Extended
BP	GO:0009658	chloroplast organization	RCA	Interproscan
BP	GO:0009704	de-etiolation	IMP	Interproscan
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	NAS	Interproscan
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010157	response to chlorate	IMP	Interproscan
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0022414	reproductive process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0033365	protein localization to organelle	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045036	protein targeting to chloroplast	None	Extended
BP	GO:0045037	protein import into chloroplast stroma	IMP	Interproscan
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0048481	plant ovule development	RCA	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0065002	intracellular protein transmembrane transport	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0071806	protein transmembrane transport	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0072594	establishment of protein localization to organelle	None	Extended
BP	GO:0072596	establishment of protein localization to chloroplast	None	Extended
BP	GO:0072598	protein localization to chloroplast	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0003917	DNA topoisomerase type I (single strand cut, ATP-independent) activity	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
MF	GO:0004521	endoribonuclease activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0006220	pyrimidine nucleotide metabolic process	IEP	HCCA
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006268	DNA unwinding involved in DNA replication	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006399	tRNA metabolic process	IEP	HCCA
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0008033	tRNA processing	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009218	pyrimidine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009220	pyrimidine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
CC	GO:0009579	thylakoid	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016226	iron-sulfur cluster assembly	IEP	HCCA
BP	GO:0016556	mRNA modification	IEP	HCCA
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	HCCA
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	HCCA
BP	GO:0018130	heterocycle biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
CC	GO:0022626	cytosolic ribosome	IEP	HCCA
BP	GO:0031123	RNA 3'-end processing	IEP	HCCA
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	HCCA
BP	GO:0031425	chloroplast RNA processing	IEP	HCCA
BP	GO:0032392	DNA geometric change	IEP	HCCA
BP	GO:0032508	DNA duplex unwinding	IEP	HCCA
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	HCCA
BP	GO:0042780	tRNA 3'-end processing	IEP	HCCA
MF	GO:0042781	3'-tRNA processing endoribonuclease activity	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0046483	heterocycle metabolic process	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	HCCA
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
MF	GO:0097747	RNA polymerase activity	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901360	organic cyclic compound metabolic process	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001404	Hsp90_fam	264	759
IPR003594	HATPase_C	100	259

External Links

No external refs found!

AT2G04030 (EMB1956, Hsp88.1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation