1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G04850

AT2G04850


Description : Auxin-responsive family protein


Gene families : OG0000289 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000289_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G04850
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00159800 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00021p00244700 evm_27.TU.AmTr_v1... Cytochrome b561 and DOMON domain-containing protein... 0.06 OrthoFinder output from all 47 species
AMTR_s00055p00147440 evm_27.TU.AmTr_v1... Cytochrome b561 and DOMON domain-containing protein... 0.08 OrthoFinder output from all 47 species
AT4G17280 No alias Auxin-responsive family protein 0.07 OrthoFinder output from all 47 species
AT5G47530 No alias Auxin-responsive family protein 0.04 OrthoFinder output from all 47 species
Adi_g016918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g045214 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g49716 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26814 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09008 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31917 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g06617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00033.t1 Aspi01Gene00033 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08817.t1 Aspi01Gene08817 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene18645.t1 Aspi01Gene18645 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28000.t1 Aspi01Gene28000 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58681.t1 Aspi01Gene58681 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene70146.t1 Aspi01Gene70146 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0064.g035659 No alias not classified & original description: CDS=1-945 0.03 OrthoFinder output from all 47 species
Cba_g04543 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g09613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G059700.1 Ceric.10G059700 not classified & original description: pacid=50612710... 0.03 OrthoFinder output from all 47 species
Ceric.11G015600.1 Ceric.11G015600 not classified & original description: pacid=50596646... 0.03 OrthoFinder output from all 47 species
Ceric.19G021000.1 Ceric.19G021000 not classified & original description: pacid=50576072... 0.05 OrthoFinder output from all 47 species
Ceric.19G042200.1 Ceric.19G042200 not classified & original description: pacid=50576537... 0.03 OrthoFinder output from all 47 species
Ceric.19G042300.1 Ceric.19G042300 not classified & original description: pacid=50576676... 0.04 OrthoFinder output from all 47 species
Dcu_g06980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13198 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01001902001 No alias Cytochrome b561 and DOMON domain-containing protein... 0.05 OrthoFinder output from all 47 species
GSVIVT01006721001 No alias Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01019543001 No alias Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01027122001 No alias Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01030035001 No alias Cytochrome b561 and DOMON domain-containing protein... 0.05 OrthoFinder output from all 47 species
GSVIVT01030038001 No alias Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01031635001 No alias Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01037693001 No alias Cytochrome b561 and DOMON domain-containing protein... 0.05 OrthoFinder output from all 47 species
Gb_13521 No alias Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
Gb_13627 No alias Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
Gb_20590 No alias Cytochrome b561 and DOMON domain-containing protein... 0.07 OrthoFinder output from all 47 species
Gb_35827 No alias Cytochrome b561 and DOMON domain-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os01g48850.1 LOC_Os01g48850 Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os01g67010.1 LOC_Os01g67010 Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os01g67030.1 LOC_Os01g67030 Cytochrome b561 and DOMON domain-containing protein... 0.05 OrthoFinder output from all 47 species
LOC_Os03g09850.1 LOC_Os03g09850 Cytochrome b561 and DOMON domain-containing protein... 0.06 OrthoFinder output from all 47 species
LOC_Os03g09880.1 LOC_Os03g09880 Cytochrome b561 and DOMON domain-containing protein... 0.05 OrthoFinder output from all 47 species
LOC_Os03g09900.1 LOC_Os03g09900 Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os04g41810.1 LOC_Os04g41810 Cytochrome b561 and DOMON domain-containing protein... 0.07 OrthoFinder output from all 47 species
LOC_Os05g48270.1 LOC_Os05g48270 Cytochrome b561 and DOMON domain-containing protein... 0.06 OrthoFinder output from all 47 species
LOC_Os08g24790.1 LOC_Os08g24790 Cytochrome b561 and DOMON domain-containing protein... 0.05 OrthoFinder output from all 47 species
LOC_Os08g41290.1 AIR12, LOC_Os08g41290 Auxin-induced in root cultures protein 12 OS=Arabidopsis... 0.14 OrthoFinder output from all 47 species
LOC_Os09g32470.1 LOC_Os09g32470 Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
Len_g05340 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g10851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g48046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431938g0010 No alias Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
MA_17349g0010 No alias Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
MA_589691g0010 No alias Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
MA_62189g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g07760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05308 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g22186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25884 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12458 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g29311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006617 No alias not classified & original description: CDS=371-1516 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016558 No alias not classified & original description: CDS=1-1230 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0852.g027775 No alias not classified & original description: CDS=1-672 0.03 OrthoFinder output from all 47 species
Smo101207 No alias Cytochrome b561 and DOMON domain-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc03g031570.4.1 Solyc03g031570 Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc05g041910.3.1 Solyc05g041910 Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc06g082860.4.1 Solyc06g082860 Cytochrome b561 and DOMON domain-containing protein... 0.06 OrthoFinder output from all 47 species
Solyc07g009340.2.1 Solyc07g009340 Cytochrome b561 and DOMON domain-containing protein... 0.09 OrthoFinder output from all 47 species
Solyc07g048050.3.1 Solyc07g048050 Cytochrome b561 and DOMON domain-containing protein... 0.07 OrthoFinder output from all 47 species
Solyc07g048070.3.1 Solyc07g048070 Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
Solyc09g019980.3.1 Solyc09g019980 Cytochrome b561 and DOMON domain-containing protein... 0.05 OrthoFinder output from all 47 species
Solyc09g056360.3.1 Solyc09g056360 Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc09g097890.2.1 Solyc09g097890 Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc10g009480.4.1 Solyc10g009480 Cytochrome b561 and DOMON domain-containing protein... 0.05 OrthoFinder output from all 47 species
Solyc11g012420.2.1 Solyc11g012420 Cytochrome b561 and DOMON domain-containing protein... 0.05 OrthoFinder output from all 47 species
Solyc12g017880.3.1 Solyc12g017880 Cytochrome b561 and DOMON domain-containing protein... 0.09 OrthoFinder output from all 47 species
Spa_g25926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g01759 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000798_P001 Zm00001e000798 Cytochrome b561 and DOMON domain-containing protein... 0.05 OrthoFinder output from all 47 species
Zm00001e000803_P001 Zm00001e000803 Cytochrome b561 and DOMON domain-containing protein... 0.1 OrthoFinder output from all 47 species
Zm00001e003620_P001 AIR12, Zm00001e003620 Auxin-induced in root cultures protein 12 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e010141_P001 Zm00001e010141 Cytochrome b561 and DOMON domain-containing protein... 0.06 OrthoFinder output from all 47 species
Zm00001e020158_P001 Zm00001e020158 Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e021936_P001 Zm00001e021936 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e026478_P001 Zm00001e026478 Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e034602_P002 Zm00001e034602 Cytochrome b561 and DOMON domain-containing protein... 0.05 OrthoFinder output from all 47 species
Zm00001e034603_P001 Zm00001e034603 Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e038803_P002 Zm00001e038803 Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0016020 membrane ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
CC GO:0000325 plant-type vacuole IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008219 cell death IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009834 plant-type secondary cell wall biogenesis IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010089 xylem development IEP HCCA
BP GO:0010383 cell wall polysaccharide metabolic process IEP HCCA
BP GO:0010410 hemicellulose metabolic process IEP HCCA
BP GO:0010413 glucuronoxylan metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010623 programmed cell death involved in cell development IEP HCCA
BP GO:0012501 programmed cell death IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044038 cell wall macromolecule biosynthetic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
CC GO:0045298 tubulin complex IEP HCCA
BP GO:0045491 xylan metabolic process IEP HCCA
BP GO:0045492 xylan biosynthetic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0070589 cellular component macromolecule biosynthetic process IEP HCCA
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903338 regulation of cell wall organization or biogenesis IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2000652 regulation of secondary cell wall biogenesis IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006593 Cyt_b561/ferric_Rdtase_TM 221 343
IPR005018 DOMON_domain 85 198
No external refs found!