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  5. AT2G05310

AT2G05310


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13500.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0008158 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008158_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G05310
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Adi_g051054 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g22876 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g23458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09343 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0002.g001516 No alias not classified & original description: CDS=155-547 0.05 OrthoFinder output from all 47 species
Cre03.g151200 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g06595 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g48927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01030083001 No alias No description available 0.06 OrthoFinder output from all 47 species
LOC_Os03g39830.1 LOC_Os03g39830 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp2g22260.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016978 No alias not classified & original description: CDS=666-1046 0.04 OrthoFinder output from all 47 species
Spa_g52094 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004952_P001 Zm00001e004952 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006098 pentose-phosphate shunt IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006636 unsaturated fatty acid biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006739 NADP metabolic process IEP HCCA
BP GO:0006740 NADPH regeneration IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0007623 circadian rhythm IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
CC GO:0009534 chloroplast thylakoid IEP HCCA
CC GO:0009535 chloroplast thylakoid membrane IEP HCCA
CC GO:0009543 chloroplast thylakoid lumen IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009637 response to blue light IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
BP GO:0009744 response to sucrose IEP HCCA
BP GO:0010114 response to red light IEP HCCA
BP GO:0010155 regulation of proton transport IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0010218 response to far red light IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
BP GO:0016108 tetraterpenoid metabolic process IEP HCCA
BP GO:0016109 tetraterpenoid biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
BP GO:0016116 carotenoid metabolic process IEP HCCA
BP GO:0016117 carotenoid biosynthetic process IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019362 pyridine nucleotide metabolic process IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0031976 plastid thylakoid IEP HCCA
CC GO:0031977 thylakoid lumen IEP HCCA
CC GO:0031978 plastid thylakoid lumen IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033559 unsaturated fatty acid metabolic process IEP HCCA
BP GO:0034285 response to disaccharide IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of monoatomic ion transmembrane transport IEP HCCA
CC GO:0042170 plastid membrane IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0043269 regulation of monoatomic ion transport IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
BP GO:0046496 nicotinamide nucleotide metabolic process IEP HCCA
BP GO:0048511 rhythmic process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051156 glucose 6-phosphate metabolic process IEP HCCA
CC GO:0055035 plastid thylakoid membrane IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1904062 regulation of monoatomic cation transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!