AT2G06020

Description : Homeodomain-like superfamily protein

Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G06020
Cluster	HCCA: Cluster_99

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00044p00042560	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.05	OrthoFinder output from all 47 species
AMTR_s00089p00057120	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.02	OrthoFinder output from all 47 species
AMTR_s00131p00063460	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
AT2G40260	No alias	Homeodomain-like superfamily protein	0.05	OrthoFinder output from all 47 species
AT4G17695	KAN3	Homeodomain-like superfamily protein	0.03	OrthoFinder output from all 47 species
AT5G45580	No alias	Homeodomain-like superfamily protein	0.05	OrthoFinder output from all 47 species
Adi_g025472	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g080178	No alias	GARP subgroup PHL transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ala_g22715	No alias	GARP subgroup PHL transcription factor & original...	0.02	OrthoFinder output from all 47 species
Als_g10728	KAN, KAN1	KANADI-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g42445	No alias	GARP subgroup PHL transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene24371.t1	Aspi01Gene24371	GARP subgroup PHL transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene48429.t1	Aspi01Gene48429	GARP subgroup PHL transcription factor & original...	0.02	OrthoFinder output from all 47 species
Cba_g03918	No alias	GARP subgroup PHL transcription factor & original...	0.03	OrthoFinder output from all 47 species
Cba_g21846	No alias	transcription factor *(CLAUSA) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.11G027500.1	Ceric.11G027500	transcription factor *(CLAUSA) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.22G025700.1	Ceric.22G025700	transcription factor *(CLAUSA) & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.28G068700.1	Ceric.28G068700	GARP subgroup PHL transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dac_g27691	No alias	GARP subgroup PHL transcription factor & original...	0.03	OrthoFinder output from all 47 species
Dcu_g26187	No alias	GARP subgroup PHL transcription factor & original...	0.02	OrthoFinder output from all 47 species
Ehy_g15807	No alias	GARP subgroup PHL transcription factor & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01012707001	No alias	No description available	0.03	OrthoFinder output from all 47 species
GSVIVT01021072001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
GSVIVT01021225001	No alias	Putative Myb family transcription factor At1g14600...	0.05	OrthoFinder output from all 47 species
GSVIVT01026319001	KAN, KAN1	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
GSVIVT01033515001	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
Gb_17469	KAN, KAN1	G2-like GARP transcription factor	0.04	OrthoFinder output from all 47 species
Gb_17966	No alias	G2-like GARP transcription factor	0.03	OrthoFinder output from all 47 species
Gb_25174	No alias	G2-like GARP transcription factor	0.02	OrthoFinder output from all 47 species
Gb_25991	No alias	G2-like GARP transcription factor	0.04	OrthoFinder output from all 47 species
Gb_25992	No alias	G2-like GARP transcription factor	0.03	OrthoFinder output from all 47 species
Gb_27262	No alias	G2-like GARP transcription factor	0.03	OrthoFinder output from all 47 species
LOC_Os03g21240.1	PHL1, LOC_Os03g21240	PHR1 transcription factor involved in proline synthesis...	0.02	OrthoFinder output from all 47 species
LOC_Os04g56990.1	LOC_Os04g56990	G2-like GARP transcription factor	0.02	OrthoFinder output from all 47 species
LOC_Os05g40960.1	LOC_Os05g40960	G2-like GARP transcription factor	0.03	OrthoFinder output from all 47 species
LOC_Os06g35140.1	LOC_Os06g35140	G2-like GARP transcription factor	0.03	OrthoFinder output from all 47 species
LOC_Os11g01480.1	LOC_Os11g01480	Putative Myb family transcription factor At1g14600...	0.05	OrthoFinder output from all 47 species
LOC_Os12g01490.1	LOC_Os12g01490	Putative Myb family transcription factor At1g14600...	0.05	OrthoFinder output from all 47 species
Len_g21596	PHR1, AtPHR1	GARP subgroup PHL transcription factor & original...	0.03	OrthoFinder output from all 47 species
MA_8183372g0010	No alias	G2-like GARP transcription factor	0.03	OrthoFinder output from all 47 species
Msp_g22383	No alias	GARP subgroup PHL transcription factor & original...	0.03	OrthoFinder output from all 47 species
Msp_g25706	No alias	transcription factor *(CLAUSA) & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g09793	PHR1, AtPHR1	GARP subgroup PHL transcription factor & original...	0.03	OrthoFinder output from all 47 species
Nbi_g15270	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g20359	KAN2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g13922	No alias	transcription factor *(CLAUSA) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g22623	KAN4, ATS	KANADI-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g19047	No alias	GARP subgroup PHL transcription factor & original...	0.03	OrthoFinder output from all 47 species
Sam_g22183	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g080730.2.1	Solyc02g080730	G2-like GARP transcription factor	0.04	OrthoFinder output from all 47 species
Solyc02g080740.3.1	Solyc02g080740	G2-like GARP transcription factor	0.04	OrthoFinder output from all 47 species
Solyc03g006150.2.1	Solyc03g006150	Putative Myb family transcription factor At1g14600...	0.03	OrthoFinder output from all 47 species
Solyc04g050070.3.1	PHL1, Solyc04g050070	G2-like GARP transcription factor	0.04	OrthoFinder output from all 47 species
Solyc05g055940.3.1	PHL1, Solyc05g055940	PHR1 transcription factor involved in proline synthesis...	0.03	OrthoFinder output from all 47 species
Solyc06g066180.4.1	Solyc06g066180	G2-like GARP transcription factor	0.03	OrthoFinder output from all 47 species
Solyc12g006280.3.1	Solyc12g006280	Putative Myb family transcription factor At1g14600...	0.03	OrthoFinder output from all 47 species
Spa_g22319	No alias	GARP subgroup PHL transcription factor & original...	0.02	OrthoFinder output from all 47 species
Tin_g03358	No alias	GARP subgroup PHL transcription factor & original...	0.02	OrthoFinder output from all 47 species
Tin_g30427	No alias	transcription factor *(CLAUSA) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e014339_P001	Zm00001e014339	Putative Myb family transcription factor At1g14600...	0.02	OrthoFinder output from all 47 species
Zm00001e015514_P001	KAN2, Zm00001e015514	G2-like GARP transcription factor	0.03	OrthoFinder output from all 47 species
Zm00001e030689_P002	Zm00001e030689	G2-like GARP transcription factor	0.04	OrthoFinder output from all 47 species
Zm00001e037731_P001	APL, WDY, Zm00001e037731	G2-like GARP transcription factor	0.03	OrthoFinder output from all 47 species
Zm00001e040203_P001	KAN2, Zm00001e040203	G2-like GARP transcription factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005199	structural constituent of cell wall	IEP	HCCA
BP	GO:0009556	microsporogenesis	IEP	HCCA
BP	GO:0009691	cytokinin biosynthetic process	IEP	HCCA
MF	GO:0009824	AMP dimethylallyltransferase activity	IEP	HCCA
MF	GO:0016410	N-acyltransferase activity	IEP	HCCA
BP	GO:0034293	sexual sporulation	IEP	HCCA
BP	GO:0042214	terpene metabolic process	IEP	HCCA
BP	GO:0043934	sporulation	IEP	HCCA
BP	GO:0046246	terpene biosynthetic process	IEP	HCCA
BP	GO:0048236	plant-type sporogenesis	IEP	HCCA
BP	GO:0048444	floral organ morphogenesis	IEP	HCCA
BP	GO:0048445	carpel morphogenesis	IEP	HCCA
BP	GO:0051321	meiotic cell cycle	IEP	HCCA
BP	GO:0052386	cell wall thickening	IEP	HCCA
BP	GO:0052543	callose deposition in cell wall	IEP	HCCA
MF	GO:0052622	ATP dimethylallyltransferase activity	IEP	HCCA
MF	GO:0052623	ADP dimethylallyltransferase activity	IEP	HCCA
MF	GO:0080072	spermidine:sinapoyl CoA N-acyltransferase activity	IEP	HCCA
MF	GO:0080089	sinapoyl spermidine:sinapoyl CoA N-acyltransferase activity	IEP	HCCA
BP	GO:1903046	meiotic cell cycle process	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT2G06020

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation