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AT2G07340 (PFD1)


Aliases : PFD1

Description : PREFOLDIN 1


Gene families : OG0004279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004279_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G07340
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Aob_g38855 PFD1 component *(PFD1) of Prefoldin co-chaperone complex &... 0.03 OrthoFinder output from all 47 species
Aop_g29599 PFD1 component *(PFD1) of Prefoldin co-chaperone complex &... 0.02 OrthoFinder output from all 47 species
Cba_g65441 No alias component *(PFD1) of Prefoldin co-chaperone complex &... 0.03 OrthoFinder output from all 47 species
Cre09.g405400 No alias Cytoskeleton.actin and tubulin folding.Prefoldin... 0.07 OrthoFinder output from all 47 species
LOC_Os02g26440.1 PFD1, LOC_Os02g26440 component PFD1 of Prefoldin co-chaperone complex 0.1 OrthoFinder output from all 47 species
Mp5g04830.1 PFD1 component PFD1 of Prefoldin co-chaperone complex 0.04 OrthoFinder output from all 47 species
Sam_g17132 No alias component *(PFD1) of Prefoldin co-chaperone complex &... 0.03 OrthoFinder output from all 47 species
Spa_g46833 PFD1 component *(PFD1) of Prefoldin co-chaperone complex &... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
CC GO:0022625 cytosolic large ribosomal subunit IEP HCCA
CC GO:0022626 cytosolic ribosome IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR002777 PFD_beta-like 12 115
No external refs found!