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  5. AT2G07725

AT2G07725


Description : Ribosomal L5P family protein


Gene families : OG0009865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009865_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G07725
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00054p00223510 evm_27.TU.AmTr_v1... 60S ribosomal protein L5, mitochondrial OS=Brassica napus 0.07 OrthoFinder output from all 47 species
AMTR_s00127p00094990 evm_27.TU.AmTr_v1... 60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum 0.08 OrthoFinder output from all 47 species
AMTR_s00251p00014110 RPS14,... Protein biosynthesis.organelle translation... 0.07 OrthoFinder output from all 47 species
AMTR_s00363p00007720 evm_27.TU.AmTr_v1... 60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum 0.03 OrthoFinder output from all 47 species
AMTR_s00370p00007710 evm_27.TU.AmTr_v1... 60S ribosomal protein L5, mitochondrial OS=Solanum tuberosum 0.05 OrthoFinder output from all 47 species
Aev_g12839 No alias component *(uL5m) of large mitoribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Aob_g39208 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_34381 No alias 60S ribosomal protein L5, mitochondrial OS=Oenothera... 0.07 OrthoFinder output from all 47 species
LOC_Os09g08890.1 LOC_Os09g08890 component mtRPL5 of large ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
Lfl_g08344 No alias component *(uL5m) of large mitoribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Mp2g12110.1 No alias component mtRPL5 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Nbi_g26173 No alias component *(uL5m) of large mitoribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Pir_g07842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15215 No alias component *(uL5m) of large mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Solyc00g500362.1.1 Solyc00g500362 component mtRPL5 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Interproscan
CC GO:0005840 ribosome ISS Interproscan
BP GO:0006412 translation ISS Interproscan
CC GO:0009507 chloroplast ISM Interproscan
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
CC GO:0000315 organellar large ribosomal subunit IEP HCCA
MF GO:0003727 single-stranded RNA binding IEP HCCA
MF GO:0004129 cytochrome-c oxidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0005751 mitochondrial respiratory chain complex IV IEP HCCA
CC GO:0005753 mitochondrial proton-transporting ATP synthase complex IEP HCCA
CC GO:0005762 mitochondrial large ribosomal subunit IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
MF GO:0008187 poly-pyrimidine tract binding IEP HCCA
MF GO:0008266 poly(U) RNA binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
CC GO:0045259 proton-transporting ATP synthase complex IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
CC GO:0045277 respiratory chain complex IV IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
MF GO:0050897 cobalt ion binding IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!