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AT2G15580


Description : RING/U-box superfamily protein


Gene families : OG0000957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000957_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G15580
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Aop_g05208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37987.t1 Aspi01Gene37987 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g45979 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_25302 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g55480.1 LOC_Os02g55480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g08250.1 LOC_Os06g08250 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp7g04520.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g28901 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g10810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g107290.3.1 Solyc01g107290 Probable E3 ubiquitin-protein ligase RHY1A... 0.03 OrthoFinder output from all 47 species
Solyc07g007160.3.1 Solyc07g007160 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e009715_P001 Zm00001e009715 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0003756 protein disulfide isomerase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004760 serine-pyruvate transaminase activity IEP HCCA
MF GO:0004871 obsolete signal transducer activity IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006873 cellular monoatomic ion homeostasis IEP HCCA
MF GO:0008453 alanine-glyoxylate transaminase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
CC GO:0009528 plastid inner membrane IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009535 chloroplast thylakoid membrane IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
CC GO:0009706 chloroplast inner membrane IEP HCCA
BP GO:0009902 chloroplast relocation IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
BP GO:0010155 regulation of proton transport IEP HCCA
BP GO:0010190 cytochrome b6f complex assembly IEP HCCA
BP GO:0010304 PSII associated light-harvesting complex II catabolic process IEP HCCA
BP GO:0010380 regulation of chlorophyll biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP HCCA
BP GO:0017004 cytochrome complex assembly IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0019750 chloroplast localization IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0030003 cellular monoatomic cation homeostasis IEP HCCA
CC GO:0031897 Tic complex IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0031969 chloroplast membrane IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034765 regulation of monoatomic ion transmembrane transport IEP HCCA
CC GO:0042170 plastid membrane IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0042744 hydrogen peroxide catabolic process IEP HCCA
BP GO:0042793 plastid transcription IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0045036 protein targeting to chloroplast IEP HCCA
BP GO:0045037 protein import into chloroplast stroma IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0048513 animal organ development IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
MF GO:0050281 serine-glyoxylate transaminase activity IEP HCCA
BP GO:0050801 monoatomic ion homeostasis IEP HCCA
BP GO:0051644 plastid localization IEP HCCA
BP GO:0051656 establishment of organelle localization IEP HCCA
BP GO:0051667 establishment of plastid localization IEP HCCA
CC GO:0055035 plastid thylakoid membrane IEP HCCA
BP GO:0055080 monoatomic cation homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072596 establishment of protein localization to chloroplast IEP HCCA
BP GO:0072598 protein localization to chloroplast IEP HCCA
BP GO:0090056 regulation of chlorophyll metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901401 regulation of tetrapyrrole metabolic process IEP HCCA
BP GO:1901463 regulation of tetrapyrrole biosynthetic process IEP HCCA
BP GO:1904062 regulation of monoatomic cation transmembrane transport IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 149 191
No external refs found!