AT2G16740 (UBC29)

Aliases : UBC29

Description : ubiquitin-conjugating enzyme 29

Gene families : OG0000200 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000200_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G16740
Cluster	HCCA: Cluster_87

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00061p00068850	ATUBC11, UBC11,...	Protein degradation.peptide...	0.03	OrthoFinder output from all 47 species
Aev_g07000	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g00340	ATUBC11, UBC11	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g00519	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g30294	UBC9	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Als_g37368	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.01	OrthoFinder output from all 47 species
Als_g43928	ATUBC11, UBC11	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g06516	EMB144, CIN4, COP10, FUS9	component *(COP10) of CDDD substrate adaptor module of...	0.04	OrthoFinder output from all 47 species
Aspi01Gene05035.t1	ATUBC11, UBC11,...	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene12695.t1	UBC10, Aspi01Gene12695	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene71425.t1	ATUBC8, UBC8,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g31392	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.17G077500.1	UBC9, Ceric.17G077500	E2 MUB ubiquitin-conjugating enzyme & original...	0.03	OrthoFinder output from all 47 species
Ceric.19G022100.1	UBC10, Ceric.19G022100	E2 MUB ubiquitin-conjugating enzyme & original...	0.04	OrthoFinder output from all 47 species
Ceric.23G049000.1	UBC9, Ceric.23G049000	E2 MUB ubiquitin-conjugating enzyme & original...	0.03	OrthoFinder output from all 47 species
Ceric.35G029400.1	UBC10, Ceric.35G029400	E2 MUB ubiquitin-conjugating enzyme & original...	0.03	OrthoFinder output from all 47 species
Dcu_g07349	UBC30	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g00153	UBC30	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01019484001	UBC10	Protein degradation.peptide...	0.03	OrthoFinder output from all 47 species
GSVIVT01024027001	UBC9	Protein degradation.peptide...	0.08	OrthoFinder output from all 47 species
Gb_10818	UBC10	conjugation E2 protein	0.02	OrthoFinder output from all 47 species
Gb_39877	ATUBC11, UBC11	conjugation E2 protein	0.03	OrthoFinder output from all 47 species
LOC_Os02g02830.1	UBC9, LOC_Os02g02830	conjugation E2 protein	0.03	OrthoFinder output from all 47 species
Len_g08905	ATUBC11, UBC11	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g07204	ATUBC11, UBC11	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g23404	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g31742	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
MA_10433698g0010	UBC30	conjugation E2 protein	0.03	OrthoFinder output from all 47 species
MA_194g0030	ATUBC11, UBC11	conjugation E2 protein	0.03	OrthoFinder output from all 47 species
Msp_g03324	ATUBC11, UBC11	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g17088	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g21739	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g18786	ATUBC11, UBC11	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g06530	No alias	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g06531	No alias	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g083570.3.1	UBC10, Solyc02g083570	conjugation E2 protein	0.09	OrthoFinder output from all 47 species
Solyc03g033410.4.1	UBC10, Solyc03g033410	conjugation E2 protein	0.12	OrthoFinder output from all 47 species
Solyc05g050230.4.1	UBC10, Solyc05g050230	Ubiquitin-conjugating enzyme E2 5A OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
Spa_g01833	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g02567	UBC10	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g05700	ATUBC11, UBC11	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g19383	ATUBC11, UBC11	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g21785	ATUBC11, UBC11	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g26850	UBC30	E2 MUB ubiquitin-conjugating enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g03039	ATUBC11, UBC11	E2 MUB ubiquiTin-conjugaTing enzyme & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g10559	UBC37	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e009636_P001	ATUBC11, UBC11,...	conjugation E2 protein	0.03	OrthoFinder output from all 47 species
Zm00001e010614_P001	EMB144, CIN4,...	E2 conjugating component COP10 of COP10-DET1 (CDD) subcomplex	0.02	OrthoFinder output from all 47 species
Zm00001e025244_P002	UBC28, Zm00001e025244	conjugation E2 protein	0.05	OrthoFinder output from all 47 species
Zm00001e033719_P001	UBC10, Zm00001e033719	conjugation E2 protein	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0001558	regulation of cell growth	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IDA	Interproscan
MF	GO:0004842	ubiquitin-protein transferase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	None	Extended
BP	GO:0006261	DNA-templated DNA replication	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IDA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010498	proteasomal protein catabolic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0022604	regulation of cell morphogenesis	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030163	protein catabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0035966	response to topologically incorrect protein	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042023	DNA endoreduplication	RCA	Interproscan
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043248	proteasome assembly	RCA	Interproscan
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0044786	cell cycle DNA replication	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051510	regulation of unidimensional cell growth	RCA	Interproscan
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0051788	response to misfolded protein	RCA	Interproscan
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0003008	system process	IEP	HCCA
BP	GO:0003013	circulatory system process	IEP	HCCA
BP	GO:0003018	vascular process in circulatory system	IEP	HCCA
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005242	inward rectifier potassium channel activity	IEP	HCCA
MF	GO:0005244	voltage-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0005249	voltage-gated potassium channel activity	IEP	HCCA
MF	GO:0005267	potassium channel activity	IEP	HCCA
MF	GO:0005385	zinc ion transmembrane transporter activity	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
BP	GO:0006813	potassium ion transport	IEP	HCCA
BP	GO:0006829	zinc ion transport	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0009962	regulation of flavonoid biosynthetic process	IEP	HCCA
BP	GO:0009963	positive regulation of flavonoid biosynthetic process	IEP	HCCA
BP	GO:0010232	vascular transport	IEP	HCCA
BP	GO:0010233	phloem transport	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015172	acidic amino acid transmembrane transporter activity	IEP	HCCA
MF	GO:0015175	neutral L-amino acid transmembrane transporter activity	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
MF	GO:0022832	voltage-gated channel activity	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022843	voltage-gated monoatomic cation channel activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
MF	GO:0030551	cyclic nucleotide binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0055078	sodium ion homeostasis	IEP	HCCA
BP	GO:0072348	sulfur compound transport	IEP	HCCA
MF	GO:0090448	glucosinolate:proton symporter activity	IEP	HCCA
BP	GO:0090449	phloem glucosinolate loading	IEP	HCCA
MF	GO:0099094	ligand-gated monoatomic cation channel activity	IEP	HCCA
BP	GO:0110126	phloem loading	IEP	HCCA
BP	GO:1901349	glucosinolate transport	IEP	HCCA
MF	GO:1901682	sulfur compound transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000608	UBQ-conjugat_E2	5	141

External Links

No external refs found!

AT2G16740 (UBC29)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation