1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G17000

AT2G17000


Description : Mechanosensitive ion channel family protein


Gene families : OG0000689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G17000
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00171160 MSL6,... Solute transport.channels.MSL mechanosensitive ion channel 0.02 OrthoFinder output from all 47 species
AT1G49260 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.01 OrthoFinder output from all 47 species
Adi_g014541 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15328 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20698.t1 MSL5, Aspi01Gene20698 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009367 MSL6 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g023959 MSL5 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.02G100000.1 MSL5, Ceric.02G100000 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.02G100500.1 MSL5, Ceric.02G100500 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.35G012600.1 MSL6, Ceric.35G012600 mechanosensitive ion channel *(MSL) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g47236 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11186 MSL6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01023959001 MSL4 Solute transport.channels.MSL mechanosensitive ion channel 0.04 OrthoFinder output from all 47 species
GSVIVT01023963001 MSL6 Solute transport.channels.MSL mechanosensitive ion channel 0.04 OrthoFinder output from all 47 species
LOC_Os04g47320.1 MSL5, LOC_Os04g47320 mechanosensitive ion channel (MSL) 0.03 OrthoFinder output from all 47 species
MA_10428116g0010 MSL10, ATMSL10 mechanosensitive ion channel (MSL) 0.03 OrthoFinder output from all 47 species
Nbi_g07829 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28577 MSL4 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007089 MSL4 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e036222_P001 MSL10, ATMSL10,... mechanosensitive ion channel (MSL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0016020 membrane ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005615 extracellular space IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0009566 fertilization IEP HCCA
BP GO:0009567 double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0010082 regulation of root meristem growth IEP HCCA
BP GO:0010193 response to ozone IEP HCCA
BP GO:0010337 regulation of salicylic acid metabolic process IEP HCCA
BP GO:0010565 regulation of cellular ketone metabolic process IEP HCCA
BP GO:0010942 positive regulation of cell death IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0019216 regulation of lipid metabolic process IEP HCCA
BP GO:0019217 regulation of fatty acid metabolic process IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0031537 regulation of anthocyanin metabolic process IEP HCCA
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP HCCA
MF GO:0033612 receptor serine/threonine kinase binding IEP HCCA
BP GO:0036294 cellular response to decreased oxygen levels IEP HCCA
BP GO:0042304 regulation of fatty acid biosynthetic process IEP HCCA
BP GO:0046890 regulation of lipid biosynthetic process IEP HCCA
BP GO:0048235 pollen sperm cell differentiation IEP HCCA
BP GO:0048441 petal development IEP HCCA
BP GO:0071453 cellular response to oxygen levels IEP HCCA
BP GO:0071456 cellular response to hypoxia IEP HCCA
BP GO:0080140 regulation of jasmonic acid metabolic process IEP HCCA
BP GO:0080141 regulation of jasmonic acid biosynthetic process IEP HCCA
BP GO:0080142 regulation of salicylic acid biosynthetic process IEP HCCA
MF GO:0090447 glycerol-3-phosphate 2-O-acyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR006685 MscS_channel 606 809
No external refs found!