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  5. AT2G17740

AT2G17740


Description : Cysteine/Histidine-rich C1 domain family protein


Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G17740
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263580 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00022p00036270 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00030p00098310 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AMTR_s00044p00070150 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT2G28270 No alias Cysteine/Histidine-rich C1 domain family protein 0.02 OrthoFinder output from all 47 species
AT2G37800 No alias Cysteine/Histidine-rich C1 domain family protein 0.02 OrthoFinder output from all 47 species
AT2G37805 No alias No description available 0.05 OrthoFinder output from all 47 species
AT2G37810 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
AT2G37820 No alias Cysteine/Histidine-rich C1 domain family protein 0.06 OrthoFinder output from all 47 species
AT2G42060 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from all 47 species
AT2G44380 No alias Cysteine/Histidine-rich C1 domain family protein 0.07 OrthoFinder output from all 47 species
AT2G44390 No alias Cysteine/Histidine-rich C1 domain family protein 0.02 OrthoFinder output from all 47 species
AT2G44400 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
AT5G43520 No alias Cysteine/Histidine-rich C1 domain family protein 0.06 OrthoFinder output from all 47 species
Adi_g052462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11277.t1 Aspi01Gene11277 E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene59532.t1 Aspi01Gene59532 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0408.g068454 No alias not classified & original description: CDS=95-1408 0.03 OrthoFinder output from all 47 species
Ceric.18G064000.1 Ceric.18G064000 E3 ubiquitin ligase *(AIRP1) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.33G006500.1 Ceric.33G006500 E3 ubiquitin ligase *(AIRP1) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g36226 No alias E3 ubiquitin ligase *(AIRP1) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01034093001 No alias No description available 0.06 OrthoFinder output from all 47 species
LOC_Os01g68460.1 LOC_Os01g68460 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g41890.1 LOC_Os07g41890 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os07g41910.1 LOC_Os07g41910 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g41920.1 LOC_Os07g41920 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g41980.1 LOC_Os07g41980 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g42040.1 LOC_Os07g42040 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g31250.1 LOC_Os08g31250 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10436357g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_18827g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_18827g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_251691g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_4432g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_940417g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004401 No alias not classified & original description: CDS=1-1194 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015605 No alias not classified & original description: CDS=1-1329 0.06 OrthoFinder output from all 47 species
Solyc01g073780.2.1 Solyc01g073780 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Solyc01g073800.2.1 Solyc01g073800 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Solyc01g073810.2.1 Solyc01g073810 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc01g073820.4.1 Solyc01g073820 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Solyc01g073840.1.1 Solyc01g073840 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Solyc01g073860.3.1 Solyc01g073860 no hits & (original description: none) 0.17 OrthoFinder output from all 47 species
Solyc01g073890.3.1 Solyc01g073890 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc02g068680.1.1 Solyc02g068680 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Solyc04g082940.3.1 Solyc04g082940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc06g072460.1.1 Solyc06g072460 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g21651 AtAIRP1, AIRP1 E3 ubiquitin ligase *(AIRP1) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0002679 respiratory burst involved in defense response RCA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006857 oligopeptide transport RCA Interproscan
BP GO:0009627 systemic acquired resistance RCA Interproscan
BP GO:0010200 response to chitin RCA Interproscan
BP GO:0034976 response to endoplasmic reticulum stress RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade IEP HCCA
BP GO:0002682 regulation of immune system process IEP HCCA
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006569 tryptophan catabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0006862 nucleotide transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009063 amino acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009074 aromatic amino acid family catabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009595 detection of biotic stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009683 indoleacetic acid metabolic process IEP HCCA
BP GO:0009684 indoleacetic acid biosynthetic process IEP HCCA
BP GO:0009696 salicylic acid metabolic process IEP HCCA
BP GO:0009697 salicylic acid biosynthetic process IEP HCCA
BP GO:0009850 auxin metabolic process IEP HCCA
BP GO:0009851 auxin biosynthetic process IEP HCCA
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009863 salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010150 leaf senescence IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP HCCA
BP GO:0010363 regulation of plant-type hypersensitive response IEP HCCA
BP GO:0010941 regulation of cell death IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015112 nitrate transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015802 basic amino acid transport IEP HCCA
BP GO:0015804 neutral amino acid transport IEP HCCA
BP GO:0015824 proline transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016045 detection of bacterium IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
BP GO:0018958 phenol-containing compound metabolic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0019684 photosynthesis, light reaction IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0031348 negative regulation of defense response IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042126 nitrate metabolic process IEP HCCA
BP GO:0042128 nitrate assimilation IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0042435 indole-containing compound biosynthetic process IEP HCCA
BP GO:0042436 indole-containing compound catabolic process IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0042446 hormone biosynthetic process IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0043067 regulation of programmed cell death IEP HCCA
BP GO:0043069 negative regulation of programmed cell death IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043900 obsolete regulation of multi-organism process IEP HCCA
BP GO:0043903 regulation of biological process involved in symbiotic interaction IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045088 regulation of innate immune response IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046189 phenol-containing compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0048585 negative regulation of response to stimulus IEP HCCA
BP GO:0050776 regulation of immune response IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060548 negative regulation of cell death IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071941 nitrogen cycle metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090693 plant organ senescence IEP HCCA
BP GO:0098543 detection of other organism IEP HCCA
BP GO:0098581 detection of external biotic stimulus IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP HCCA
BP GO:2001057 reactive nitrogen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004146 DC1 10 56
IPR004146 DC1 66 114
No external refs found!