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  5. AT2G19830

AT2G19830 (SNF7.2, VPS32)


Aliases : SNF7.2, VPS32

Description : SNF7 family protein


Gene families : OG0001125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G19830
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
Adi_g019238 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Adi_g109174 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.04 OrthoFinder output from all 47 species
Adi_g109176 SNF7.2, VPS32 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Ceric.1Z151000.1 SNF7.1, Ceric.1Z151000 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.02 OrthoFinder output from all 47 species
Ceric.32G014400.1 SNF7.1, Ceric.32G014400 component *(VPS32/SNF7) of ESCRT-III complex & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01016913001 SNF7.1 Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 OrthoFinder output from all 47 species
LOC_Os09g09480.2 SNF7.2, VPS32,... component VPS32/SNF7 of ESCRT-III complex 0.04 OrthoFinder output from all 47 species
Mp6g10770.1 SNF7.2, VPS32 component VPS32/SNF7 of ESCRT-III complex 0.03 OrthoFinder output from all 47 species
Zm00001e024016_P002 SNF7.1, Zm00001e024016 component VPS32/SNF7 of ESCRT-III complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000815 ESCRT III complex ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0016192 vesicle-mediated transport ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000060 obsolete protein import into nucleus, translocation IEP HCCA
CC GO:0000139 Golgi membrane IEP HCCA
CC GO:0000164 protein phosphatase type 1 complex IEP HCCA
CC GO:0000325 plant-type vacuole IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005770 late endosome IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005798 Golgi-associated vesicle IEP HCCA
CC GO:0005801 cis-Golgi network IEP HCCA
CC GO:0005829 cytosol IEP HCCA
BP GO:0006301 postreplication repair IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006892 post-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006896 Golgi to vacuole transport IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0008320 protein transmembrane transporter activity IEP HCCA
BP GO:0010563 negative regulation of phosphorus metabolic process IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0010923 negative regulation of phosphatase activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
CC GO:0016469 proton-transporting two-sector ATPase complex IEP HCCA
MF GO:0022884 macromolecule transmembrane transporter activity IEP HCCA
CC GO:0030133 transport vesicle IEP HCCA
CC GO:0030134 COPII-coated ER to Golgi transport vesicle IEP HCCA
CC GO:0030135 coated vesicle IEP HCCA
CC GO:0030136 clathrin-coated vesicle IEP HCCA
CC GO:0030140 trans-Golgi network transport vesicle IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031371 ubiquitin conjugating enzyme complex IEP HCCA
CC GO:0031372 UBC13-MMS2 complex IEP HCCA
BP GO:0031400 negative regulation of protein modification process IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
BP GO:0032515 negative regulation of phosphoprotein phosphatase activity IEP HCCA
CC GO:0032588 trans-Golgi network membrane IEP HCCA
BP GO:0035305 negative regulation of dephosphorylation IEP HCCA
BP GO:0035308 negative regulation of protein dephosphorylation IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0045936 negative regulation of phosphate metabolic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0051346 negative regulation of hydrolase activity IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140318 protein transporter activity IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR005024 Snf7_fam 21 183
No external refs found!