AT2G20180 (PIL5, PIF1)

Aliases : PIL5, PIF1

Description : phytochrome interacting factor 3-like 5

Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G20180

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00008p00265010	HEC2,...	RNA biosynthesis.transcriptional activation.bHLH...	0.03	OrthoFinder output from all 47 species
AMTR_s00011p00241810	CIB1,...	External stimuli response.light.UV-A/blue...	0.03	OrthoFinder output from all 47 species
AMTR_s00065p00184910	LRL1,...	RNA biosynthesis.transcriptional activation.bHLH...	0.03	OrthoFinder output from all 47 species
AMTR_s00071p00111940	HEC2,...	RNA biosynthesis.transcriptional activation.bHLH...	0.02	OrthoFinder output from all 47 species
AMTR_s00079p00137860	BEE3,...	External stimuli response.light.UV-A/blue...	0.03	OrthoFinder output from all 47 species
AMTR_s00106p00127480	UNE10,...	RNA biosynthesis.transcriptional activation.bHLH...	0.02	OrthoFinder output from all 47 species
AMTR_s00133p00027110	BPEp, ZCW32,...	External stimuli response.light.UV-A/blue...	0.03	OrthoFinder output from all 47 species
AT1G59640	BPEp, ZCW32, BPE, BPEub	BIG PETAL P	0.03	OrthoFinder output from all 47 species
AT4G00120	GT140, IND1, IND, EDA33	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.05	OrthoFinder output from all 47 species
AT4G02590	UNE12	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.04	OrthoFinder output from all 47 species
AT5G50915	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.04	OrthoFinder output from all 47 species
Adi_g036691	LRL3	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g042065	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g085081	No alias	regulatory protein (CIB) of blue light perception &...	0.02	OrthoFinder output from all 47 species
Aev_g03333	No alias	regulatory protein (CIB) of blue light perception &...	0.02	OrthoFinder output from all 47 species
Aev_g08253	HEC2	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g17229	No alias	regulatory protein (CIB) of blue light perception &...	0.03	OrthoFinder output from all 47 species
Aev_g17433	CIB1	regulatory protein (CIB) of blue light perception &...	0.02	OrthoFinder output from all 47 species
Aev_g23312	LRL3	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g06285	LRL3	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g07904	CIB1	regulatory protein (CIB) of blue light perception &...	0.03	OrthoFinder output from all 47 species
Ala_g10321	LRL3	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g18353	HEC1	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ala_g26066	No alias	regulatory protein (CIB) of blue light perception &...	0.03	OrthoFinder output from all 47 species
Ala_g26152	No alias	regulatory protein (CIB) of blue light perception &...	0.04	OrthoFinder output from all 47 species
Ala_g37842	SPT	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g39083	SPT	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g22777	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g32315	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g33578	PIF3, POC1, PAP3	bHLH-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Aob_g18590	SPT	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g21794	No alias	regulatory protein (CIB) of blue light perception &...	0.06	OrthoFinder output from all 47 species
Aop_g29424	LRL3	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene04843.t1	LRL3, Aspi01Gene04843	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene12606.t2	Aspi01Gene12606	regulatory protein (CIB) of blue light perception &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene28550.t1	CIB1, Aspi01Gene28550	regulatory protein (CIB) of blue light perception &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene43314.t1	CIB1, Aspi01Gene43314	regulatory protein (CIB) of blue light perception &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene46366.t1	HEC2, Aspi01Gene46366	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene54622.t1	LRL3, Aspi01Gene54622	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene59376.t1	HEC3, Aspi01Gene59376	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene66676.t2	Aspi01Gene66676	regulatory protein (CIB) of blue light perception &...	0.05	OrthoFinder output from all 47 species
Aspi01Gene66741.t2	PIL5, PIF1,...	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0043.g026959	No alias	regulatory protein (CIB) of blue light perception &...	0.03	OrthoFinder output from all 47 species
Azfi_s0113.g045847	No alias	regulatory protein (CIB) of blue light perception &...	0.03	OrthoFinder output from all 47 species
Cba_g01170	HEC3	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g08736	LRL3	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g15079	No alias	regulatory protein (CIB) of blue light perception &...	0.05	OrthoFinder output from all 47 species
Cba_g15803	No alias	regulatory protein (CIB) of blue light perception &...	0.04	OrthoFinder output from all 47 species
Cba_g70482	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.06G076000.1	Ceric.06G076000	bHLH-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.10G063500.1	PIF3, POC1,...	bHLH-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.11G032200.1	Ceric.11G032200	regulatory protein (CIB) of blue light perception &...	0.04	OrthoFinder output from all 47 species
Ceric.1Z049600.1	Ceric.1Z049600	regulatory protein (CIB) of blue light perception &...	0.03	OrthoFinder output from all 47 species
Ceric.22G021400.1	CIB5, Ceric.22G021400	regulatory protein (CIB) of blue light perception &...	0.04	OrthoFinder output from all 47 species
Ceric.26G029500.1	Ceric.26G029500	regulatory protein (CIB) of blue light perception &...	0.05	OrthoFinder output from all 47 species
Ceric.28G002800.1	Ceric.28G002800	regulatory protein (CIB) of blue light perception &...	0.03	OrthoFinder output from all 47 species
Ceric.31G051300.1	LRL3, Ceric.31G051300	bHLH-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.39G010000.1	LRL3, Ceric.39G010000	bHLH-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g07111	No alias	regulatory protein (CIB) of blue light perception &...	0.02	OrthoFinder output from all 47 species
Dac_g16940	No alias	regulatory protein (CIB) of blue light perception &...	0.04	OrthoFinder output from all 47 species
Dac_g39719	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g19533	No alias	regulatory protein (CIB) of blue light perception &...	0.03	OrthoFinder output from all 47 species
Dcu_g51679	HEC2	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g06216	LRL3	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g07694	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g08656	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g03657	LRL3	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g05786	SPT	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g06624	No alias	regulatory protein (CIB) of blue light perception &...	0.04	OrthoFinder output from all 47 species
Ehy_g09150	PIF3, POC1, PAP3	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g11022	RSL2	bHLH-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g28520	ALC	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01009292001	No alias	External stimuli response.light.UV-A/blue...	0.03	OrthoFinder output from all 47 species
GSVIVT01011873001	No alias	External stimuli response.light.UV-A/blue...	0.05	OrthoFinder output from all 47 species
GSVIVT01013553001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.04	OrthoFinder output from all 47 species
GSVIVT01018164001	UNE10	Transcription factor UNE10 OS=Arabidopsis thaliana	0.07	OrthoFinder output from all 47 species
GSVIVT01018165001	UNE10	RNA biosynthesis.transcriptional activation.bHLH...	0.06	OrthoFinder output from all 47 species
GSVIVT01023783001	CIB1	External stimuli response.light.UV-A/blue...	0.04	OrthoFinder output from all 47 species
GSVIVT01025313001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.06	OrthoFinder output from all 47 species
GSVIVT01026056001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.03	OrthoFinder output from all 47 species
GSVIVT01028516001	PIL5, PIF1	External stimuli response.light.red/far red light.PIF...	0.06	OrthoFinder output from all 47 species
GSVIVT01033350001	No alias	External stimuli response.light.UV-A/blue...	0.07	OrthoFinder output from all 47 species
GSVIVT01033356001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.07	OrthoFinder output from all 47 species
LOC_Os02g47660.1	CIB1, LOC_Os02g47660	transcription factor (bHLH). transcriptional regulator (CIB)	0.03	OrthoFinder output from all 47 species
LOC_Os05g04740.2	PIF3, POC1,...	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
LOC_Os05g46370.1	LOC_Os05g46370	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
LOC_Os06g08500.1	LRL3, LOC_Os06g08500	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
LOC_Os07g05010.2	PIL5, PIF1,...	transcription factor (bHLH). PIF red/far-red light...	0.05	OrthoFinder output from all 47 species
LOC_Os08g01700.1	HEC3, LOC_Os08g01700	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
LOC_Os08g42470.1	LOC_Os08g42470	transcription factor (bHLH). transcriptional regulator (CIB)	0.03	OrthoFinder output from all 47 species
LOC_Os09g28210.1	HEC1, LOC_Os09g28210	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
LOC_Os11g25560.1	LOC_Os11g25560	transcription factor (bHLH). transcriptional regulator (CIB)	0.06	OrthoFinder output from all 47 species
LOC_Os12g40590.1	SPT, LOC_Os12g40590	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Len_g13668	LRL3	bHLH-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Len_g22408	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Len_g29979	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g30069	RSL2	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g37113	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g37660	No alias	regulatory protein (CIB) of blue light perception &...	0.03	OrthoFinder output from all 47 species
MA_10344244g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_10432919g0010	CIB1	transcription factor (bHLH). transcriptional regulator (CIB)	0.04	OrthoFinder output from all 47 species
MA_88831g0010	No alias	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Mp5g18910.1	HEC1	transcription factor (bHLH)	0.02	OrthoFinder output from all 47 species
Mp6g21470.1	RSL2	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
Mpzg01410.1	LRL3	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Msp_g30793	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g42257	CIB1	regulatory protein (CIB) of blue light perception &...	0.03	OrthoFinder output from all 47 species
Nbi_g11730	No alias	regulatory protein (CIB) of blue light perception &...	0.02	OrthoFinder output from all 47 species
Nbi_g16867	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g18447	SPT	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g33520	CIB1	regulatory protein (CIB) of blue light perception &...	0.03	OrthoFinder output from all 47 species
Ore_g34452	RSL2	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g42592	LRL3	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g43163	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g34122	No alias	regulatory protein (CIB) of blue light perception &...	0.03	OrthoFinder output from all 47 species
Pnu_g21397	RSL4	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g33726	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c3_8460V3.1	RSL2, Pp3c3_8460	ROOT HAIR DEFECTIVE 6-LIKE 2	0.02	OrthoFinder output from all 47 species
Ppi_g28847	No alias	regulatory protein (CIB) of blue light perception &...	0.03	OrthoFinder output from all 47 species
Ppi_g32176	RSL2	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006234	No alias	bHLH-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Sam_g17031	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g36377	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g48191	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Smo402301	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.03	OrthoFinder output from all 47 species
Smo405220	HEC1	RNA biosynthesis.transcriptional activation.bHLH...	0.03	OrthoFinder output from all 47 species
Smo419388	RSL2	RNA biosynthesis.transcriptional activation.bHLH...	0.03	OrthoFinder output from all 47 species
Solyc01g107140.3.1	Solyc01g107140	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
Solyc01g109700.3.1	CIB1, Solyc01g109700	transcription factor (bHLH). transcriptional regulator (CIB)	0.07	OrthoFinder output from all 47 species
Solyc02g062690.3.1	BEE2, Solyc02g062690	transcription factor (bHLH). transcriptional regulator (CIB)	0.06	OrthoFinder output from all 47 species
Solyc02g091440.2.1	RHD6, Solyc02g091440	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Solyc03g034000.3.1	BEE2, Solyc03g034000	transcription factor (bHLH). transcriptional regulator (CIB)	0.04	OrthoFinder output from all 47 species
Solyc03g115540.2.1	UNE10, Solyc03g115540	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Solyc03g119390.4.1	BEE3, Solyc03g119390	transcription factor (bHLH). transcriptional regulator (CIB)	0.04	OrthoFinder output from all 47 species
Solyc12g088380.1.1	RSL2, Solyc12g088380	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Solyc12g098620.2.1	Solyc12g098620	transcription factor (bHLH). transcriptional regulator (CIB)	0.03	OrthoFinder output from all 47 species
Solyc12g100140.3.1	Solyc12g100140	transcription factor (bHLH)	0.05	OrthoFinder output from all 47 species
Spa_g05058	No alias	regulatory protein (CIB) of blue light perception &...	0.02	OrthoFinder output from all 47 species
Spa_g06721	SPT	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g10023	No alias	regulatory protein (CIB) of blue light perception &...	0.02	OrthoFinder output from all 47 species
Spa_g14752	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g18981	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g37930	No alias	regulatory protein (CIB) of blue light perception &...	0.02	OrthoFinder output from all 47 species
Spa_g40542	LRL3	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g57305	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g08390	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g08764	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g13566	SPT	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g38881	SPT	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e002331_P003	UNE10, Zm00001e002331	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Zm00001e005046_P003	PIL5, PIF1,...	transcription factor (bHLH). PIF red/far-red light...	0.04	OrthoFinder output from all 47 species
Zm00001e006917_P001	PIL5, PIF1,...	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Zm00001e010138_P002	Zm00001e010138	transcription factor (bHLH). transcriptional regulator (CIB)	0.05	OrthoFinder output from all 47 species
Zm00001e011084_P002	Zm00001e011084	transcription factor (bHLH). transcriptional regulator (CIB)	0.03	OrthoFinder output from all 47 species
Zm00001e011410_P001	Zm00001e011410	transcription factor (bHLH). transcriptional regulator (CIB)	0.02	OrthoFinder output from all 47 species
Zm00001e018946_P001	Zm00001e018946	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Zm00001e019392_P001	Zm00001e019392	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Zm00001e020012_P001	Zm00001e020012	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Zm00001e022005_P003	Zm00001e022005	transcription factor (bHLH). transcriptional regulator (CIB)	0.06	OrthoFinder output from all 47 species
Zm00001e027758_P002	Zm00001e027758	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Zm00001e029147_P001	HEC3, Zm00001e029147	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Zm00001e032280_P001	Zm00001e032280	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Zm00001e034446_P001	CIB5, Zm00001e034446	transcription factor (bHLH). transcriptional regulator (CIB)	0.04	OrthoFinder output from all 47 species
Zm00001e034658_P003	Zm00001e034658	transcription factor (bHLH). transcriptional regulator (CIB)	0.02	OrthoFinder output from all 47 species
Zm00001e035219_P001	Zm00001e035219	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
Zm00001e036408_P003	SPT, Zm00001e036408	transcription factor (bHLH)	0.02	OrthoFinder output from all 47 species
Zm00001e041668_P001	PIL5, PIF1,...	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IDA	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	IDA	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	TAS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IMP	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006778	porphyrin-containing compound metabolic process	None	Extended
BP	GO:0006779	porphyrin-containing compound biosynthetic process	None	Extended
BP	GO:0006783	heme biosynthetic process	IMP	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009606	tropism	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009629	response to gravity	None	Extended
BP	GO:0009630	gravitropism	None	Extended
BP	GO:0009639	response to red or far red light	None	Extended
BP	GO:0009685	gibberellin metabolic process	None	Extended
BP	GO:0009686	gibberellin biosynthetic process	IMP	Interproscan
BP	GO:0009686	gibberellin biosynthetic process	RCA	Interproscan
BP	GO:0009740	gibberellic acid mediated signaling pathway	IMP	Interproscan
BP	GO:0009740	gibberellic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009845	seed germination	RCA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009959	negative gravitropism	IMP	Interproscan
BP	GO:0009959	negative gravitropism	TAS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010017	red or far-red light signaling pathway	None	Extended
BP	GO:0010029	regulation of seed germination	TAS	Interproscan
BP	GO:0010099	regulation of photomorphogenesis	TAS	Interproscan
BP	GO:0010100	negative regulation of photomorphogenesis	IMP	Interproscan
BP	GO:0010114	response to red light	None	Extended
BP	GO:0010161	red light signaling pathway	IDA	Interproscan
BP	GO:0010187	negative regulation of seed germination	IMP	Interproscan
BP	GO:0010187	negative regulation of seed germination	IGI	Interproscan
MF	GO:0010313	phytochrome binding	IDA	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010476	gibberellin mediated signaling pathway	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0015994	chlorophyll metabolic process	None	Extended
BP	GO:0015995	chlorophyll biosynthetic process	IMP	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016101	diterpenoid metabolic process	None	Extended
BP	GO:0016102	diterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033014	tetrapyrrole biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042168	heme metabolic process	None	Extended
BP	GO:0042440	pigment metabolic process	None	Extended
MF	GO:0042802	identical protein binding	IPI	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046148	pigment biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048581	negative regulation of post-embryonic development	None	Extended
BP	GO:0048583	regulation of response to stimulus	None	Extended
BP	GO:0048585	negative regulation of response to stimulus	None	Extended
BP	GO:0048608	reproductive structure development	RCA	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051093	negative regulation of developmental process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051241	negative regulation of multicellular organismal process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071478	cellular response to radiation	None	Extended
BP	GO:0071482	cellular response to light stimulus	None	Extended
BP	GO:0071489	cellular response to red or far red light	None	Extended
BP	GO:0071491	cellular response to red light	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1900140	regulation of seedling development	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000030	regulation of response to red or far red light	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000038	very long-chain fatty acid metabolic process	IEP	HCCA
MF	GO:0003993	acid phosphatase activity	IEP	HCCA
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
MF	GO:0004722	protein serine/threonine phosphatase activity	IEP	HCCA
BP	GO:0006417	regulation of translation	IEP	HCCA
BP	GO:0006633	fatty acid biosynthetic process	IEP	HCCA
BP	GO:0008283	cell population proliferation	IEP	HCCA
BP	GO:0009735	response to cytokinin	IEP	HCCA
BP	GO:0009739	response to gibberellin	IEP	HCCA
BP	GO:0009890	negative regulation of biosynthetic process	IEP	HCCA
BP	GO:0009965	leaf morphogenesis	IEP	HCCA
BP	GO:0010162	seed dormancy process	IEP	HCCA
BP	GO:0010229	inflorescence development	IEP	HCCA
BP	GO:0010422	regulation of brassinosteroid biosynthetic process	IEP	HCCA
BP	GO:0010423	negative regulation of brassinosteroid biosynthetic process	IEP	HCCA
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	HCCA
BP	GO:0010894	negative regulation of steroid biosynthetic process	IEP	HCCA
BP	GO:0019216	regulation of lipid metabolic process	IEP	HCCA
BP	GO:0019218	regulation of steroid metabolic process	IEP	HCCA
BP	GO:0022611	dormancy process	IEP	HCCA
BP	GO:0030497	fatty acid elongation	IEP	HCCA
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0032350	regulation of hormone metabolic process	IEP	HCCA
BP	GO:0032351	negative regulation of hormone metabolic process	IEP	HCCA
BP	GO:0032353	negative regulation of hormone biosynthetic process	IEP	HCCA
BP	GO:0034248	regulation of amide metabolic process	IEP	HCCA
BP	GO:0045833	negative regulation of lipid metabolic process	IEP	HCCA
BP	GO:0045939	negative regulation of steroid metabolic process	IEP	HCCA
BP	GO:0046885	regulation of hormone biosynthetic process	IEP	HCCA
BP	GO:0046890	regulation of lipid biosynthetic process	IEP	HCCA
MF	GO:0046982	protein heterodimerization activity	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
BP	GO:0048367	shoot system development	IEP	HCCA
BP	GO:0048731	system development	IEP	HCCA
BP	GO:0050810	regulation of steroid biosynthetic process	IEP	HCCA
BP	GO:0051055	negative regulation of lipid biosynthetic process	IEP	HCCA
BP	GO:0090030	regulation of steroid hormone biosynthetic process	IEP	HCCA
BP	GO:0090032	negative regulation of steroid hormone biosynthetic process	IEP	HCCA
BP	GO:0090567	reproductive shoot system development	IEP	HCCA
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011598	bHLH_dom	217	263

External Links

No external refs found!

AT2G20180 (PIL5, PIF1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation