AT2G21060 (GRP2B, ATGRP2B, ATCSP4)

Aliases : GRP2B, ATGRP2B, ATCSP4

Description : glycine-rich protein 2B

Gene families : OG0001037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001037_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G21060

Target	Alias	Description	ECC score	Gene Family Method
Dac_g06546	GRP2B, ATGRP2B, ATCSP4	cold-responsive mRNA chaperone *(CSD) & original...	0.04	OrthoFinder output from all 47 species
Solyc01g111300.4.1	GRP2B, ATGRP2B,...	RNA chaperone (CSP). mRNA chaperone (CSD)	0.03	OrthoFinder output from all 47 species
Zm00001e041725_P001	CSDP1, Zm00001e041725	RNA chaperone (CSP). mRNA chaperone (CSD)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009266	response to temperature stimulus	None	Extended
BP	GO:0009409	response to cold	IEP	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0010154	fruit development	IMP	Interproscan
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
BP	GO:0010103	stomatal complex morphogenesis	IEP	HCCA
BP	GO:0090626	plant epidermis morphogenesis	IEP	HCCA
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002059	CSP_DNA-bd	16	80
IPR001878	Znf_CCHC	137	153
IPR001878	Znf_CCHC	182	197

External Links

No external refs found!