AT2G21620 (RD2)

Aliases : RD2

Description : Adenine nucleotide alpha hydrolases-like superfamily protein

Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G21620

Target	Alias	Description	ECC score	Gene Family Method
AT3G62550	No alias	Adenine nucleotide alpha hydrolases-like superfamily protein	0.03	OrthoFinder output from all 47 species
Adi_g001566	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g106201	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g113108	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g05790	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g35611	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g38455	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g37343	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g66074	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene24164.t2	RD2, Aspi01Gene24164	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene28484.t1	Aspi01Gene28484	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g27633	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.24G021300.1	Ceric.24G021300	not classified & original description: pacid=50629890...	0.02	OrthoFinder output from all 47 species
Dac_g00478	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Dac_g29720	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g00289	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g02307	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g10171	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01017725001	No alias	No description available	0.04	OrthoFinder output from all 47 species
Gb_24984	No alias	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
Len_g48313	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g24168	RD2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g25399	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
MA_10435390g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Msp_g03098	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g02626	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g59107	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g59165	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0190.g025258	No alias	not classified & original description: CDS=1-597	0.04	OrthoFinder output from all 47 species
Sam_g07744	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g04360	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g38853	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e020196_P001	Zm00001e020196	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
BP	GO:0002238	response to molecule of fungal origin	RCA	Interproscan
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006643	membrane lipid metabolic process	None	Extended
BP	GO:0006664	glycolipid metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009247	glycolipid biosynthetic process	None	Extended
BP	GO:0009267	cellular response to starvation	None	Extended
BP	GO:0009269	response to desiccation	IEP	Interproscan
BP	GO:0009414	response to water deprivation	None	Extended
BP	GO:0009415	response to water	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016036	cellular response to phosphate starvation	RCA	Interproscan
BP	GO:0019374	galactolipid metabolic process	None	Extended
BP	GO:0019375	galactolipid biosynthetic process	RCA	Interproscan
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042594	response to starvation	None	Extended
BP	GO:0042631	cellular response to water deprivation	RCA	Interproscan
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0046467	membrane lipid biosynthetic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071214	cellular response to abiotic stimulus	None	Extended
BP	GO:0071229	cellular response to acid chemical	None	Extended
BP	GO:0071462	cellular response to water stimulus	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0104004	cellular response to environmental stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1901701	cellular response to oxygen-containing compound	None	Extended
BP	GO:1903509	liposaccharide metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0009642	response to light intensity	IEP	HCCA
BP	GO:0009646	response to absence of light	IEP	HCCA
BP	GO:0009742	brassinosteroid mediated signaling pathway	IEP	HCCA
BP	GO:0009826	unidimensional cell growth	IEP	HCCA
BP	GO:0010167	response to nitrate	IEP	HCCA
MF	GO:0016595	glutamate binding	IEP	HCCA
MF	GO:0016597	amino acid binding	IEP	HCCA
MF	GO:0031406	carboxylic acid binding	IEP	HCCA
MF	GO:0043177	organic acid binding	IEP	HCCA
BP	GO:0043401	steroid hormone mediated signaling pathway	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006016	UspA	40	167

External Links

No external refs found!

AT2G21620 (RD2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation