Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39860.2); Has 247 Blast hits to 231 proteins in 42 species: Archae - 0; Bacteria - 17; Metazoa - 14; Fungi - 5; Plants - 145; Viruses - 0; Other Eukaryotes - 66 (source: NCBI BLink).
Gene families : OG0001287 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001287_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT2G22270 | |
| Cluster | HCCA: Cluster_76 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g078217 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g04119 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene23722.t1 | Aspi01Gene23722 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g14813 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g11407 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000314 | organellar small ribosomal subunit | IEP | HCCA |
| MF | GO:0004810 | CCA tRNA nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| CC | GO:0005763 | mitochondrial small ribosomal subunit | IEP | HCCA |
| BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006354 | DNA-templated transcription elongation | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006473 | protein acetylation | IEP | HCCA |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0009218 | pyrimidine ribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009220 | pyrimidine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009606 | tropism | IEP | HCCA |
| BP | GO:0009629 | response to gravity | IEP | HCCA |
| BP | GO:0009630 | gravitropism | IEP | HCCA |
| MF | GO:0010427 | abscisic acid binding | IEP | HCCA |
| CC | GO:0015935 | small ribosomal subunit | IEP | HCCA |
| MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
| MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0016573 | histone acetylation | IEP | HCCA |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0019840 | isoprenoid binding | IEP | HCCA |
| MF | GO:0019899 | enzyme binding | IEP | HCCA |
| MF | GO:0031406 | carboxylic acid binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0033293 | monocarboxylic acid binding | IEP | HCCA |
| MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
| MF | GO:0042562 | hormone binding | IEP | HCCA |
| MF | GO:0043177 | organic acid binding | IEP | HCCA |
| MF | GO:0043178 | alcohol binding | IEP | HCCA |
| BP | GO:0043966 | histone H3 acetylation | IEP | HCCA |
| BP | GO:0043967 | histone H4 acetylation | IEP | HCCA |
| MF | GO:0051020 | GTPase binding | IEP | HCCA |
| MF | GO:0070567 | cytidylyltransferase activity | IEP | HCCA |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | HCCA |
| CC | GO:0098798 | mitochondrial protein-containing complex | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| No external refs found! |
