AT2G22690

Description : zinc ion binding

Gene families : OG0002380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002380_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G22690

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0051.g031420	No alias	E3 ubiquitin ligase component *(GID2) of GID...	0.04	OrthoFinder output from all 47 species
Cre11.g467574	No alias	Protein RMD5 homolog OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Len_g07346	No alias	E3 ubiquitin ligase component *(GID2) of GID...	0.03	OrthoFinder output from all 47 species
Tin_g01800	No alias	E3 ubiquiTin ligase component *(GID2) of GID...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR027370	Znf-RING_euk	324	365
IPR024964	CTLH/CRA	144	286

External Links

No external refs found!