AT2G24260 (LRL1)

Aliases : LRL1

Description : LJRHL1-like 1

Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G24260

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00228970	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.bHLH...	0.02	OrthoFinder output from all 47 species
Adi_g117961	HEC2	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g10597	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g15255	No alias	regulatory protein (CIB) of blue light perception &...	0.03	OrthoFinder output from all 47 species
Aev_g19667	LRL3	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g61116	HEC2	bHLH-type transcription factor & original description: none	0.09	OrthoFinder output from all 47 species
Aspi01Gene04843.t2	LRL3, Aspi01Gene04843	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene40972.t1	PIF3, POC1,...	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene67543.t1	SPT, Aspi01Gene67543	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g13645	LRL3	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g35134	LRL3	bHLH-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Ceric.16G013800.1	RHD6, Ceric.16G013800	bHLH-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.23G058700.1	Ceric.23G058700	bHLH-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Dac_g21654	HEC1	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dac_g30817	SPT	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g29606	No alias	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01008299001	BEE3	External stimuli response.light.UV-A/blue...	0.04	OrthoFinder output from all 47 species
GSVIVT01031020001	BEE3	External stimuli response.light.UV-A/blue...	0.04	OrthoFinder output from all 47 species
LOC_Os01g38610.1	LOC_Os01g38610	transcription factor (bHLH)	0.05	OrthoFinder output from all 47 species
LOC_Os06g08500.1	LRL3, LOC_Os06g08500	transcription factor (bHLH)	0.02	OrthoFinder output from all 47 species
LOC_Os09g33580.2	LOC_Os09g33580	transcription factor (bHLH). transcriptional regulator (CIB)	0.04	OrthoFinder output from all 47 species
Msp_g25009	LRL3	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g26946	No alias	bHLH-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g14714	HEC1	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g13591	LRL3	bHLH-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Solyc04g005220.3.1	Solyc04g005220	transcription factor (bHLH). transcriptional regulator (CIB)	0.04	OrthoFinder output from all 47 species
Solyc09g065820.4.1	UNE12, Solyc09g065820	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
Solyc09g083220.3.1	UNE12, Solyc09g083220	transcription factor (bHLH)	0.05	OrthoFinder output from all 47 species
Solyc09g097870.4.1	Solyc09g097870	transcription factor (bHLH). transcriptional regulator (CIB)	0.05	OrthoFinder output from all 47 species
Zm00001e020477_P001	Zm00001e020477	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
Zm00001e023327_P001	CIB1, Zm00001e023327	transcription factor (bHLH). transcriptional regulator (CIB)	0.05	OrthoFinder output from all 47 species
Zm00001e027758_P002	Zm00001e027758	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Zm00001e030725_P001	Zm00001e030725	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Zm00001e034528_P001	Zm00001e034528	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048468	cell development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0080147	root hair cell development	IMP	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011598	bHLH_dom	149	194

External Links

No external refs found!

AT2G24260 (LRL1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation