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  5. AT2G25460

AT2G25460


Description : CONTAINS InterPro DOMAIN/s: C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G04860.1); Has 108 Blast hits to 69 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0001166 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001166_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G25460

Target Alias Description ECC score Gene Family Method Actions
Adi_g011130 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056920 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g074957 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g113186 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05090 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g05316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12915 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32181.t1 Aspi01Gene32181 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene39423.t1 Aspi01Gene39423 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46910.t1 Aspi01Gene46910 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0054.g033618 No alias not classified & original description: CDS=121-2442 0.05 OrthoFinder output from all 47 species
Cba_g37856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G049000.1 Ceric.12G049000 not classified & original description: pacid=50602417... 0.03 OrthoFinder output from all 47 species
Dac_g08103 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g11710 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g14436 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04088 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g18695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g28805 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035860001 No alias No description available 0.11 OrthoFinder output from all 47 species
Gb_29317 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_30870 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Lfl_g18918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10364181g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_958331g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp7g19530.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g13135 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g14623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13857 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44178 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27804 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002651 No alias not classified & original description: CDS=459-2660 0.05 OrthoFinder output from all 47 species
Smo439353 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc08g059710.4.1 Solyc08g059710 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Spa_g17144 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g38308 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e025940_P001 Zm00001e025940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0010200 response to chitin RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0000165 MAPK cascade IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002376 immune system process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
BP GO:0002682 regulation of immune system process IEP HCCA
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004364 glutathione transferase activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004623 phospholipase A2 activity IEP HCCA
MF GO:0004709 MAP kinase kinase kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009061 anaerobic respiration IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009556 microsporogenesis IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0009612 response to mechanical stimulus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009646 response to absence of light IEP HCCA
BP GO:0009692 ethylene metabolic process IEP HCCA
BP GO:0009693 ethylene biosynthetic process IEP HCCA
BP GO:0009694 jasmonic acid metabolic process IEP HCCA
BP GO:0009695 jasmonic acid biosynthetic process IEP HCCA
BP GO:0009696 salicylic acid metabolic process IEP HCCA
BP GO:0009697 salicylic acid biosynthetic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009723 response to ethylene IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009738 abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009751 response to salicylic acid IEP HCCA
BP GO:0009753 response to jasmonic acid IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009863 salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009873 ethylene-activated signaling pathway IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0009961 response to 1-aminocyclopropane-1-carboxylic acid IEP HCCA
BP GO:0009969 xyloglucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010043 response to zinc ion IEP HCCA
BP GO:0010193 response to ozone IEP HCCA
BP GO:0010363 regulation of plant-type hypersensitive response IEP HCCA
BP GO:0010411 xyloglucan metabolic process IEP HCCA
BP GO:0010449 root meristem growth IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0010941 regulation of cell death IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016045 detection of bacterium IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
BP GO:0018958 phenol-containing compound metabolic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
BP GO:0022622 root system development IEP HCCA
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0031348 negative regulation of defense response IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033037 polysaccharide localization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0033843 xyloglucan 6-xylosyltransferase activity IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0034293 sexual sporulation IEP HCCA
BP GO:0034976 response to endoplasmic reticulum stress IEP HCCA
MF GO:0035252 UDP-xylosyltransferase activity IEP HCCA
BP GO:0035266 meristem growth IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042171 lysophosphatidic acid acyltransferase activity IEP HCCA
MF GO:0042285 xylosyltransferase activity IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0043067 regulation of programmed cell death IEP HCCA
BP GO:0043069 negative regulation of programmed cell death IEP HCCA
BP GO:0043200 response to amino acid IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0043449 cellular alkene metabolic process IEP HCCA
BP GO:0043450 alkene biosynthetic process IEP HCCA
BP GO:0043903 regulation of biological process involved in symbiotic interaction IEP HCCA
BP GO:0043934 sporulation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0045088 regulation of innate immune response IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0046189 phenol-containing compound biosynthetic process IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0048236 plant-type sporogenesis IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0048585 negative regulation of response to stimulus IEP HCCA
BP GO:0050688 regulation of defense response to virus IEP HCCA
BP GO:0050691 regulation of defense response to virus by host IEP HCCA
BP GO:0050776 regulation of immune response IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051865 protein autoubiquitination IEP HCCA
BP GO:0052386 cell wall thickening IEP HCCA
BP GO:0052542 defense response by callose deposition IEP HCCA
BP GO:0052543 callose deposition in cell wall IEP HCCA
BP GO:0052545 callose localization IEP HCCA
BP GO:0055088 lipid homeostasis IEP HCCA
BP GO:0055089 fatty acid homeostasis IEP HCCA
BP GO:0055090 acylglycerol homeostasis IEP HCCA
BP GO:0055091 phospholipid homeostasis IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0060548 negative regulation of cell death IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070328 triglyceride homeostasis IEP HCCA
BP GO:0070542 response to fatty acid IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
MF GO:0071617 lysophospholipid acyltransferase activity IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
BP GO:0098543 detection of other organism IEP HCCA
BP GO:0098581 detection of external biotic stimulus IEP HCCA
BP GO:0098754 detoxification IEP HCCA
BP GO:0120251 hydrocarbon biosynthetic process IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
BP GO:0120254 olefinic compound metabolic process IEP HCCA
BP GO:0120255 olefinic compound biosynthetic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1900673 olefin metabolic process IEP HCCA
BP GO:1900674 olefin biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902065 response to L-glutamate IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019448 NT-C2 4 166
No external refs found!