1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G25700

AT2G25700 (ASK3, SK3)


Aliases : ASK3, SK3

Description : SKP1-like 3


Gene families : OG0000379 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000379_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G25700
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AT2G03160 SK19, ASK19 SKP1-like 19 0.06 OrthoFinder output from all 47 species
AT2G03170 ASK14, SK14 SKP1-like 14 0.06 OrthoFinder output from all 47 species
AT3G21830 SK8, ASK8 SKP1-like 8 0.04 OrthoFinder output from all 47 species
AT3G21840 ASK7, SK7 SKP1-like 7 0.04 OrthoFinder output from all 47 species
AT3G21850 SK9, ASK9 SKP1-like 9 0.04 OrthoFinder output from all 47 species
AT3G53060 SK6, ASK6 SKP1-like 6 0.02 OrthoFinder output from all 47 species
AT3G60010 SK13, ASK13 SKP1-like 13 0.05 OrthoFinder output from all 47 species
AT4G34470 SK12, ASK12 SKP1-like 12 0.07 OrthoFinder output from all 47 species
Cba_g38923 No alias ASK-type linker component of SCF E3 ubiquitin ligase... 0.01 OrthoFinder output from all 47 species
Ehy_g08142 ASK1, ATSKP1,... ASK-type linker component of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
LOC_Os02g13180.1 SK9, ASK9, LOC_Os02g13180 target protein binding component SKP1/ASK1 of... 0.03 OrthoFinder output from all 47 species
LOC_Os07g05150.1 ASK2, SKP1B,... target protein binding component SKP1/ASK1 of... 0.04 OrthoFinder output from all 47 species
LOC_Os07g05160.1 ASK4, SK4, LOC_Os07g05160 target protein binding component SKP1/ASK1 of... 0.03 OrthoFinder output from all 47 species
LOC_Os07g05180.1 ASK2, SKP1B,... target protein binding component SKP1/ASK1 of... 0.04 OrthoFinder output from all 47 species
LOC_Os07g43270.1 ASK1, ATSKP1,... target protein binding component SKP1/ASK1 of... 0.03 OrthoFinder output from all 47 species
LOC_Os08g28820.1 ASK1, ATSKP1,... target protein binding component SKP1/ASK1 of... 0.04 OrthoFinder output from all 47 species
LOC_Os09g10200.1 ASK1, ATSKP1,... target protein binding component SKP1/ASK1 of... 0.01 OrthoFinder output from all 47 species
LOC_Os09g10270.1 ASK4, SK4, LOC_Os09g10270 target protein binding component SKP1/ASK1 of... 0.03 OrthoFinder output from all 47 species
LOC_Os09g10300.1 ASK4, SK4, LOC_Os09g10300 target protein binding component SKP1/ASK1 of... 0.03 OrthoFinder output from all 47 species
Ppi_g09622 ASK2, SKP1B ASK-type linker component of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Smo98727 ASK1, ATSKP1,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Solyc03g112710.1.1 ASK2, SKP1B,... target protein binding component SKP1/ASK1 of... 0.03 OrthoFinder output from all 47 species
Solyc11g008230.1.1 ASK11, SK11,... target protein binding component SKP1/ASK1 of... 0.03 OrthoFinder output from all 47 species
Solyc11g008400.2.1 ASK4, SK4, Solyc11g008400 target protein binding component SKP1/ASK1 of... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
MF GO:0003886 DNA (cytosine-5-)-methyltransferase activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0009008 DNA-methyltransferase activity IEP HCCA
BP GO:0009691 cytokinin biosynthetic process IEP HCCA
MF GO:0009824 AMP dimethylallyltransferase activity IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0042991 obsolete transcription factor import into nucleus IEP HCCA
MF GO:0052622 ATP dimethylallyltransferase activity IEP HCCA
MF GO:0052623 ADP dimethylallyltransferase activity IEP HCCA
BP GO:0060688 regulation of morphogenesis of a branching structure IEP HCCA
BP GO:1905428 regulation of plant organ formation IEP HCCA
BP GO:2000032 regulation of secondary shoot formation IEP HCCA
InterPro domains Description Start Stop
IPR016072 Skp1_comp_dimer 115 161
IPR016073 Skp1_comp_POZ 6 65
No external refs found!