AT2G27550 (ATC)

Aliases : ATC

Description : centroradialis

Gene families : OG0000434 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000434_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G27550

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00024p00249400	evm_27.TU.AmTr_v1...	Protein MOTHER of FT and TFL1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AMTR_s00114p00070400	ATC,...	CEN-like protein 2 OS=Nicotiana tabacum	0.03	OrthoFinder output from all 47 species
AT1G18100	E12A11, MFT	PEBP (phosphatidylethanolamine-binding protein) family protein	0.03	OrthoFinder output from all 47 species
AT1G65480	FT	PEBP (phosphatidylethanolamine-binding protein) family protein	0.04	OrthoFinder output from all 47 species
Aev_g39970	TFL-1, TFL1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g01471	TFL-1, TFL1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g25350	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g28947	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g31721	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g69306	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g69369	FT	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g69370	FT	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.06G045500.1	Ceric.06G045500	not classified & original description: pacid=50620154...	0.03	OrthoFinder output from all 47 species
Ceric.19G003400.1	E12A11, MFT,...	not classified & original description: pacid=50576006...	0.03	OrthoFinder output from all 47 species
Ceric.22G072500.1	Ceric.22G072500	not classified & original description: pacid=50613817...	0.04	OrthoFinder output from all 47 species
Ceric.22G072600.1	Ceric.22G072600	not classified & original description: pacid=50614502...	0.03	OrthoFinder output from all 47 species
Dac_g14590	TFL-1, TFL1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g12975	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g30835	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01033829001	TFL-1, TFL1	Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01036145001	ATC	CEN-like protein 2 OS=Nicotiana tabacum	0.04	OrthoFinder output from all 47 species
Gb_17505	FT	PEB protein-dependent signalling regulatory protein (PEBP)	0.03	OrthoFinder output from all 47 species
Gb_17506	FT	PEB protein-dependent signalling regulatory protein (PEBP)	0.05	OrthoFinder output from all 47 species
LOC_Os01g11940.1	FT, LOC_Os01g11940	PEB protein-dependent signalling regulatory protein (PEBP)	0.03	OrthoFinder output from all 47 species
LOC_Os05g44180.1	FT, LOC_Os05g44180	PEB protein-dependent signalling regulatory protein (PEBP)	0.02	OrthoFinder output from all 47 species
LOC_Os06g06300.1	FT, LOC_Os06g06300	PEB protein-dependent signalling regulatory protein (PEBP)	0.03	OrthoFinder output from all 47 species
LOC_Os06g30370.1	E12A11, MFT,...	PEB protein-dependent signalling regulatory protein (PEBP)	0.03	OrthoFinder output from all 47 species
LOC_Os11g18870.1	FT, LOC_Os11g18870	PEB protein-dependent signalling regulatory protein (PEBP)	0.04	OrthoFinder output from all 47 species
Len_g53659	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Len_g57185	E12A11, MFT	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Len_g57325	TFL-1, TFL1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g37497	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g40470	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g44484	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g47036	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g14626	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g17134	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g00291	E12A11, MFT	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g58271	FT	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g04982	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g27748	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g33595	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g079290.3.1	E12A11, MFT,...	PEB protein-dependent signalling regulatory protein (PEBP)	0.03	OrthoFinder output from all 47 species
Solyc05g055660.3.1	FT, Solyc05g055660	PEB protein-dependent signalling regulatory protein (PEBP)	0.03	OrthoFinder output from all 47 species
Solyc09g009560.2.1	TFL-1, TFL1,...	PEB protein-dependent signalling regulatory protein (PEBP)	0.03	OrthoFinder output from all 47 species
Tin_g35798	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g40601	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g44572	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g45908	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e008880_P001	TSF, Zm00001e008880	PEB protein-dependent signalling regulatory protein (PEBP)	0.05	OrthoFinder output from all 47 species
Zm00001e017104_P001	E12A11, MFT,...	PEB protein-dependent signalling regulatory protein (PEBP)	0.02	OrthoFinder output from all 47 species
Zm00001e025657_P001	E12A11, MFT,...	PEB protein-dependent signalling regulatory protein (PEBP)	0.02	OrthoFinder output from all 47 species
Zm00001e039371_P002	ATC, Zm00001e039371	PEB protein-dependent signalling regulatory protein (PEBP)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	RCA	Interproscan
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005543	phospholipid binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008289	lipid binding	None	Extended
MF	GO:0008429	phosphatidylethanolamine binding	ISS	Interproscan
BP	GO:0009909	regulation of flower development	None	Extended
BP	GO:0009910	negative regulation of flower development	IMP	Interproscan
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IMP	Interproscan
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048581	negative regulation of post-embryonic development	None	Extended
BP	GO:0048831	regulation of shoot system development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0051093	negative regulation of developmental process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051241	negative regulation of multicellular organismal process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended
BP	GO:2000242	negative regulation of reproductive process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004601	peroxidase activity	IEP	HCCA
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	HCCA
MF	GO:0005385	zinc ion transmembrane transporter activity	IEP	HCCA
BP	GO:0006694	steroid biosynthetic process	IEP	HCCA
BP	GO:0006826	iron ion transport	IEP	HCCA
BP	GO:0006829	zinc ion transport	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0007154	cell communication	IEP	HCCA
BP	GO:0008202	steroid metabolic process	IEP	HCCA
BP	GO:0009267	cellular response to starvation	IEP	HCCA
CC	GO:0009505	plant-type cell wall	IEP	HCCA
BP	GO:0009553	embryo sac development	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009888	tissue development	IEP	HCCA
BP	GO:0009991	response to extracellular stimulus	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010043	response to zinc ion	IEP	HCCA
BP	GO:0010053	root epidermal cell differentiation	IEP	HCCA
BP	GO:0010087	phloem or xylem histogenesis	IEP	HCCA
BP	GO:0010106	cellular response to iron ion starvation	IEP	HCCA
BP	GO:0010167	response to nitrate	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0015706	nitrate transmembrane transport	IEP	HCCA
BP	GO:0016128	phytosteroid metabolic process	IEP	HCCA
BP	GO:0016129	phytosteroid biosynthetic process	IEP	HCCA
BP	GO:0016131	brassinosteroid metabolic process	IEP	HCCA
BP	GO:0016132	brassinosteroid biosynthetic process	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA
BP	GO:0021700	developmental maturation	IEP	HCCA
BP	GO:0031667	response to nutrient levels	IEP	HCCA
BP	GO:0031668	cellular response to extracellular stimulus	IEP	HCCA
BP	GO:0031669	cellular response to nutrient levels	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0042445	hormone metabolic process	IEP	HCCA
BP	GO:0042594	response to starvation	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0048229	gametophyte development	IEP	HCCA
BP	GO:0048364	root development	IEP	HCCA
BP	GO:0048469	cell maturation	IEP	HCCA
BP	GO:0048527	lateral root development	IEP	HCCA
BP	GO:0048528	post-embryonic root development	IEP	HCCA
BP	GO:0048764	trichoblast maturation	IEP	HCCA
BP	GO:0048765	root hair cell differentiation	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0055085	transmembrane transport	IEP	HCCA
BP	GO:0071496	cellular response to external stimulus	IEP	HCCA
BP	GO:0071695	anatomical structure maturation	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0090627	plant epidermal cell differentiation	IEP	HCCA
BP	GO:0090696	post-embryonic plant organ development	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098661	inorganic anion transmembrane transport	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:1902025	nitrate import	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008914	PEBP	52	162

External Links

No external refs found!

AT2G27550 (ATC)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation