1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G27580

AT2G27580


Description : A20/AN1-like zinc finger family protein


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G27580
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Adi_g009203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g012492 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020813 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g046888 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16396 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00971 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16584 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25155.t1 Aspi01Gene25155 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0068.g036297 No alias not classified & original description: CDS=37-531 0.03 OrthoFinder output from all 47 species
Cba_g04875 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G038300.1 Ceric.01G038300 not classified & original description: pacid=50591812... 0.02 OrthoFinder output from all 47 species
Dac_g09022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g09225 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g18237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g09926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01033341001 No alias Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Len_g03084 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g21159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29468 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g59335 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g21543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g24579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04739 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g59316 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06047 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g15864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g46007 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55465 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008612 No alias not classified & original description: CDS=1-753 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013142 No alias not classified & original description: CDS=1-786 0.03 OrthoFinder output from all 47 species
Sam_g00863 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g03099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014082_P001 Zm00001e014082 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Zm00001e025028_P001 Zm00001e025028 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000302 response to reactive oxygen species IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005654 nucleoplasm IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0009408 response to heat IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009691 cytokinin biosynthetic process IEP HCCA
BP GO:0009825 multidimensional cell growth IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0009896 positive regulation of catabolic process IEP HCCA
BP GO:0009908 flower development IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010150 leaf senescence IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
BP GO:0042176 regulation of protein catabolic process IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045732 positive regulation of protein catabolic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
BP GO:0090693 plant organ senescence IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 106 140
IPR002653 Znf_A20 11 34
No external refs found!