AT2G27660

Description : Cysteine/Histidine-rich C1 domain family protein

Gene families : OG0000892 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G27660

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00012p00263580	evm_27.TU.AmTr_v1...	No description available	0.04	OrthoFinder output from all 47 species
AMTR_s00012p00263620	evm_27.TU.AmTr_v1...	No description available	0.03	OrthoFinder output from all 47 species
AMTR_s00022p00036270	evm_27.TU.AmTr_v1...	No description available	0.04	OrthoFinder output from all 47 species
AMTR_s00030p00098310	evm_27.TU.AmTr_v1...	No description available	0.04	OrthoFinder output from all 47 species
AT2G28270	No alias	Cysteine/Histidine-rich C1 domain family protein	0.03	OrthoFinder output from all 47 species
AT2G37780	No alias	Cysteine/Histidine-rich C1 domain family protein	0.09	OrthoFinder output from all 47 species
AT2G37800	No alias	Cysteine/Histidine-rich C1 domain family protein	0.03	OrthoFinder output from all 47 species
AT2G37805	No alias	No description available	0.05	OrthoFinder output from all 47 species
AT2G37820	No alias	Cysteine/Histidine-rich C1 domain family protein	0.04	OrthoFinder output from all 47 species
AT2G44380	No alias	Cysteine/Histidine-rich C1 domain family protein	0.08	OrthoFinder output from all 47 species
AT2G44390	No alias	Cysteine/Histidine-rich C1 domain family protein	0.03	OrthoFinder output from all 47 species
AT2G44400	No alias	Cysteine/Histidine-rich C1 domain family protein	0.08	OrthoFinder output from all 47 species
AT5G40590	No alias	Cysteine/Histidine-rich C1 domain family protein	0.04	OrthoFinder output from all 47 species
AT5G43520	No alias	Cysteine/Histidine-rich C1 domain family protein	0.08	OrthoFinder output from all 47 species
Aop_g13719	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g13834	No alias	E3 ubiquitin ligase *(AIRP1) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene11277.t1	Aspi01Gene11277	E3 ubiquitin ligase *(AIRP1) & original description: none	0.05	OrthoFinder output from all 47 species
Aspi01Gene14056.t1	RHB1A, Aspi01Gene14056	E3 ubiquitin ligase *(AIRP1) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene59532.t1	Aspi01Gene59532	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Azfi_s0408.g068454	No alias	not classified & original description: CDS=95-1408	0.05	OrthoFinder output from all 47 species
Azfi_s2885.g113560	No alias	not classified & original description: CDS=689-1675	0.03	OrthoFinder output from all 47 species
Ceric.16G051800.1	Ceric.16G051800	E3 ubiquitin ligase *(AIRP1) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.18G064000.1	Ceric.18G064000	E3 ubiquitin ligase *(AIRP1) & original description:...	0.09	OrthoFinder output from all 47 species
Ceric.18G071100.1	Ceric.18G071100	E3 ubiquitin ligase *(AIRP1) & original description:...	0.05	OrthoFinder output from all 47 species
Ceric.1Z042300.1	Ceric.1Z042300	E3 ubiquitin ligase *(AIRP1) & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.33G006200.1	Ceric.33G006200	not classified & original description: pacid=50606483...	0.03	OrthoFinder output from all 47 species
Ceric.33G006500.1	Ceric.33G006500	E3 ubiquitin ligase *(AIRP1) & original description:...	0.03	OrthoFinder output from all 47 species
Dcu_g36226	No alias	E3 ubiquitin ligase *(AIRP1) & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g01391	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01034093001	No alias	No description available	0.04	OrthoFinder output from all 47 species
LOC_Os01g68460.1	LOC_Os01g68460	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
LOC_Os07g41890.1	LOC_Os07g41890	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
LOC_Os07g41910.1	LOC_Os07g41910	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
LOC_Os07g41980.1	LOC_Os07g41980	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os07g42040.1	LOC_Os07g42040	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os07g42070.1	LOC_Os07g42070	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os08g31250.1	LOC_Os08g31250	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
LOC_Os08g31280.1	LOC_Os08g31280	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os09g31980.1	LOC_Os09g31980	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_18827g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_18827g0020	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_251691g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_4432g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Msp_g44989	No alias	E3 ubiquitin ligase *(AIRP1) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g43990	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004401	No alias	not classified & original description: CDS=1-1194	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0063.g015605	No alias	not classified & original description: CDS=1-1329	0.03	OrthoFinder output from all 47 species
Solyc01g073780.2.1	Solyc01g073780	no hits & (original description: none)	0.08	OrthoFinder output from all 47 species
Solyc01g073800.2.1	Solyc01g073800	no hits & (original description: none)	0.11	OrthoFinder output from all 47 species
Solyc01g073810.2.1	Solyc01g073810	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc01g073820.4.1	Solyc01g073820	no hits & (original description: none)	0.11	OrthoFinder output from all 47 species
Solyc01g073840.1.1	Solyc01g073840	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
Solyc01g073860.3.1	Solyc01g073860	no hits & (original description: none)	0.11	OrthoFinder output from all 47 species
Solyc01g073890.3.1	Solyc01g073890	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Solyc02g068680.1.1	Solyc02g068680	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
Solyc03g097960.1.1	Solyc03g097960	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc06g072460.1.1	Solyc06g072460	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Solyc09g011270.4.1	Solyc09g011270	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Spa_g07241	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g09771	No alias	E3 ubiquitin ligase *(AIRP1) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g21651	AtAIRP1, AIRP1	E3 ubiquitin ligase *(AIRP1) & original description: none	0.06	OrthoFinder output from all 47 species
Tin_g21972	No alias	E3 ubiquiTin ligase *(AIRP1) & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e038822_P001	Zm00001e038822	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0002252	immune effector process	None	Extended
BP	GO:0002376	immune system process	None	Extended
BP	GO:0002679	respiratory burst involved in defense response	RCA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006865	amino acid transport	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010167	response to nitrate	RCA	Interproscan
BP	GO:0010200	response to chitin	RCA	Interproscan
BP	GO:0010243	response to organonitrogen compound	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
BP	GO:0015706	nitrate transmembrane transport	RCA	Interproscan
BP	GO:0015711	organic anion transport	None	Extended
BP	GO:0015804	neutral amino acid transport	None	Extended
BP	GO:0015824	proline transport	RCA	Interproscan
BP	GO:0015849	organic acid transport	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0045730	respiratory burst	None	Extended
BP	GO:0046942	carboxylic acid transport	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098661	inorganic anion transmembrane transport	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902025	nitrate import	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002832	negative regulation of response to biotic stimulus	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
CC	GO:0005886	plasma membrane	IEP	HCCA
BP	GO:0006568	tryptophan metabolic process	IEP	HCCA
BP	GO:0006569	tryptophan catabolic process	IEP	HCCA
BP	GO:0006586	indolalkylamine metabolic process	IEP	HCCA
BP	GO:0006665	sphingolipid metabolic process	IEP	HCCA
BP	GO:0006857	oligopeptide transport	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0008219	cell death	IEP	HCCA
BP	GO:0009074	aromatic amino acid family catabolic process	IEP	HCCA
BP	GO:0009683	indoleacetic acid metabolic process	IEP	HCCA
BP	GO:0009684	indoleacetic acid biosynthetic process	IEP	HCCA
BP	GO:0009851	auxin biosynthetic process	IEP	HCCA
BP	GO:0010119	regulation of stomatal movement	IEP	HCCA
BP	GO:0010150	leaf senescence	IEP	HCCA
BP	GO:0010306	rhamnogalacturonan II biosynthetic process	IEP	HCCA
BP	GO:0010393	galacturonan metabolic process	IEP	HCCA
BP	GO:0010396	rhamnogalacturonan II metabolic process	IEP	HCCA
BP	GO:0015833	peptide transport	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016763	pentosyltransferase activity	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
BP	GO:0030148	sphingolipid biosynthetic process	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
BP	GO:0032102	negative regulation of response to external stimulus	IEP	HCCA
MF	GO:0035252	UDP-xylosyltransferase activity	IEP	HCCA
MF	GO:0042285	xylosyltransferase activity	IEP	HCCA
BP	GO:0042436	indole-containing compound catabolic process	IEP	HCCA
BP	GO:0042886	amide transport	IEP	HCCA
BP	GO:0045488	pectin metabolic process	IEP	HCCA
BP	GO:0045489	pectin biosynthetic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0046519	sphingoid metabolic process	IEP	HCCA
BP	GO:0046520	sphingoid biosynthetic process	IEP	HCCA
BP	GO:0052325	cell wall pectin biosynthetic process	IEP	HCCA
BP	GO:0052546	cell wall pectin metabolic process	IEP	HCCA
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0090333	regulation of stomatal closure	IEP	HCCA
BP	GO:0090693	plant organ senescence	IEP	HCCA
BP	GO:1900424	regulation of defense response to bacterium	IEP	HCCA
BP	GO:1900425	negative regulation of defense response to bacterium	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004146	DC1	68	116
IPR004146	DC1	125	175
IPR004146	DC1	15	59

External Links

No external refs found!

AT2G27660

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation