1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G28070

AT2G28070


Description : ABC-2 type transporter family protein


Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G28070

Target Alias Description ECC score Gene Family Method Actions
Aev_g39654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42715 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25229 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g02591 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12763 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15684 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11275 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g30955 ATWBC11, ABCG11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44861 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g42494 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g64200.1 LOC_Os03g64200 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
LOC_Os10g35180.1 ATWBC11, ABCG11,... suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Lfl_g34849 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g16690.1 No alias subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Msp_g14599 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0191.g025310 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: CDS=6-2411 0.03 OrthoFinder output from all 47 species
Zm00001e006437_P002 Zm00001e006437 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0031123 RNA 3'-end processing IEP HCCA
BP GO:0042780 tRNA 3'-end processing IEP HCCA
MF GO:0042781 3'-tRNA processing endoribonuclease activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 141 283
IPR013525 ABC_2_trans 443 653
No external refs found!