AT2G28520 (VHA-A1)

Aliases : VHA-A1

Description : vacuolar proton ATPase A1

Gene families : OG0001824 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001824_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G28520

Target	Alias	Description	ECC score	Gene Family Method
Adi_g018736	VHA-A2	subunit a of V-type ATPase membrane V0 subcomplex &...	0.04	OrthoFinder output from all 47 species
Ala_g11864	VHA-A2	subunit a of V-type ATPase membrane V0 subcomplex &...	0.06	OrthoFinder output from all 47 species
Als_g06369	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Aob_g03533	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Azfi_s0548.g076432	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.06	OrthoFinder output from all 47 species
Ceric.21G018800.1	VHA-A2, Ceric.21G018800	subunit a of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Cre04.g220350	VHA-A3	Solute transport.primary active transport.V-type ATPase...	0.02	OrthoFinder output from all 47 species
Dde_g04903	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
Ehy_g06112	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
GSVIVT01024208001	VHA-A2	Solute transport.primary active transport.V-type ATPase...	0.07	OrthoFinder output from all 47 species
GSVIVT01025116001	VHA-A1	Solute transport.primary active transport.V-type ATPase...	0.06	OrthoFinder output from all 47 species
LOC_Os01g61780.1	VHA-A1, LOC_Os01g61780	subunit a of V-type ATPase membrane V0 subcomplex	0.05	OrthoFinder output from all 47 species
Len_g12572	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Len_g27718	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
Lfl_g02233	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.08	OrthoFinder output from all 47 species
Msp_g15866	VHA-A2	subunit a of V-type ATPase membrane V0 subcomplex &...	0.02	OrthoFinder output from all 47 species
Nbi_g04395	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.05	OrthoFinder output from all 47 species
Ore_g25323	VHA-A2	subunit a of V-type ATPase membrane V0 subcomplex &...	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010189	VHA-A3	subunit a of V-type ATPase membrane V0 subcomplex &...	0.03	OrthoFinder output from all 47 species
Solyc01g110120.3.1	VHA-A3, Solyc01g110120	subunit a of V-type ATPase membrane V0 subcomplex	0.04	OrthoFinder output from all 47 species
Solyc11g072530.2.1	VHA-A1, Solyc11g072530	subunit a of V-type ATPase membrane V0 subcomplex	0.07	OrthoFinder output from all 47 species
Zm00001e028800_P002	VHA-A1, Zm00001e028800	subunit a of V-type ATPase membrane V0 subcomplex	0.05	OrthoFinder output from all 47 species
Zm00001e038568_P001	VHA-A3, Zm00001e038568	subunit a of V-type ATPase membrane V0 subcomplex	0.11	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
CC	GO:0005768	endosome	IDA	Interproscan
CC	GO:0005773	vacuole	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005802	trans-Golgi network	IDA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0012506	vesicle membrane	None	Extended
CC	GO:0012510	trans-Golgi network transport vesicle membrane	IDA	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	ISS	Interproscan
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0030658	transport vesicle membrane	None	Extended
CC	GO:0030659	cytoplasmic vesicle membrane	None	Extended
CC	GO:0030660	Golgi-associated vesicle membrane	None	Extended
CC	GO:0030662	coated vesicle membrane	None	Extended
CC	GO:0030665	clathrin-coated vesicle membrane	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0070070	proton-transporting V-type ATPase complex assembly	IMP	Interproscan
BP	GO:0070071	proton-transporting two-sector ATPase complex assembly	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	HCCA
BP	GO:0000271	polysaccharide biosynthetic process	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003756	protein disulfide isomerase activity	IEP	HCCA
MF	GO:0004620	phospholipase activity	IEP	HCCA
CC	GO:0005643	nuclear pore	IEP	HCCA
CC	GO:0005829	cytosol	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006073	cellular glucan metabolic process	IEP	HCCA
BP	GO:0006405	RNA export from nucleus	IEP	HCCA
BP	GO:0006409	tRNA export from nucleus	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	IEP	HCCA
BP	GO:0006897	endocytosis	IEP	HCCA
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	HCCA
BP	GO:0009250	glucan biosynthetic process	IEP	HCCA
CC	GO:0009504	cell plate	IEP	HCCA
CC	GO:0009524	phragmoplast	IEP	HCCA
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	HCCA
MF	GO:0016864	intramolecular oxidoreductase activity, transposing S-S bonds	IEP	HCCA
BP	GO:0016926	protein desumoylation	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
BP	GO:0030243	cellulose metabolic process	IEP	HCCA
BP	GO:0030244	cellulose biosynthetic process	IEP	HCCA
BP	GO:0033692	cellular polysaccharide biosynthetic process	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0042743	hydrogen peroxide metabolic process	IEP	HCCA
BP	GO:0044042	glucan metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
MF	GO:0047262	polygalacturonate 4-alpha-galacturonosyltransferase activity	IEP	HCCA
MF	GO:0047714	galactolipase activity	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0050657	nucleic acid transport	IEP	HCCA
BP	GO:0050658	RNA transport	IEP	HCCA
BP	GO:0050665	hydrogen peroxide biosynthetic process	IEP	HCCA
BP	GO:0051031	tRNA transport	IEP	HCCA
BP	GO:0051168	nuclear export	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051236	establishment of RNA localization	IEP	HCCA
BP	GO:0051273	beta-glucan metabolic process	IEP	HCCA
BP	GO:0051274	beta-glucan biosynthetic process	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
BP	GO:0072593	reactive oxygen species metabolic process	IEP	HCCA
BP	GO:0080119	ER body organization	IEP	HCCA
BP	GO:0097064	ncRNA export from nucleus	IEP	HCCA
BP	GO:1903409	reactive oxygen species biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002490	V-ATPase_116kDa_su	37	814

External Links

No external refs found!

AT2G28520 (VHA-A1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation