AT2G28680


Description : RmlC-like cupins superfamily protein


Gene families : OG0000481 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000481_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G28680

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01022907001 No alias No description available 0.04 OrthoFinder output from all 47 species
Len_g07654 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Len_g37579 No alias Globulin-type seed storage protein *(CR) & original... 0.02 OrthoFinder output from all 47 species
Solyc09g072560.4.1 CRU1, CRA1,... 11S globulin seed storage protein 2 OS=Sesamum indicum... 0.03 OrthoFinder output from all 47 species
Solyc09g090150.4.1 CRU2, CRB, Solyc09g090150 no description available(sp|a0a1l6k371|jugn4_jugni : 418.0) 0.03 OrthoFinder output from all 47 species
Zm00001e017768_P001 Zm00001e017768 11S globulin seed storage protein 2 OS=Sesamum indicum... 0.02 OrthoFinder output from all 47 species
Zm00001e027621_P002 Zm00001e027621 Glutelin type-D 1 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
MF GO:0045735 nutrient reservoir activity ISS Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
BP GO:0006360 transcription by RNA polymerase I IEP HCCA
BP GO:0010208 pollen wall assembly IEP HCCA
BP GO:0010584 pollen exine formation IEP HCCA
BP GO:0010927 cellular component assembly involved in morphogenesis IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
CC GO:0015935 small ribosomal subunit IEP HCCA
CC GO:0022627 cytosolic small ribosomal subunit IEP HCCA
MF GO:0051119 sugar transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR006045 Cupin_1 196 338
IPR006045 Cupin_1 9 157
No external refs found!