AT2G29100 (ATGLR2.9, GLR2.9)

Aliases : ATGLR2.9, GLR2.9

Description : glutamate receptor 2.9

Gene families : OG0000075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G29100

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00140120	GLR2.7,...	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
AMTR_s00019p00179820	GLR2.2,...	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
AMTR_s00019p00182440	GLR2.8,...	Solute transport.channels.GLR ligand-gated cation channel	0.04	OrthoFinder output from all 47 species
AMTR_s00019p00182630	GLR2.7,...	Solute transport.channels.GLR ligand-gated cation channel	0.04	OrthoFinder output from all 47 species
AMTR_s00019p00186040	GLR2.2,...	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
AMTR_s00021p00176450	ATGLR2.9,...	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
AMTR_s00055p00227100	GLR2.2,...	Solute transport.channels.GLR ligand-gated cation channel	0.03	OrthoFinder output from all 47 species
AT2G24710	GLR2.3, ATGLR2.3	glutamate receptor 2.3	0.04	OrthoFinder output from all 47 species
AT2G24720	GLR2.2, ATGLR2.2	glutamate receptor 2.2	0.06	OrthoFinder output from all 47 species
AT3G07520	GLR1.4, ATGLR1.4	glutamate receptor 1.4	0.04	OrthoFinder output from all 47 species
AT5G11180	ATGLR2.6, GLR2.6	glutamate receptor 2.6	0.07	OrthoFinder output from all 47 species
AT5G27100	GLR2.1, ATGLR2.1	glutamate receptor 2.1	0.07	OrthoFinder output from all 47 species
Adi_g059369	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g13740	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g14271	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g43000	GLR3.6, ATGLR3.6	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g14362	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g33382	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene02193.t1	GLR3.3,...	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene30484.t1	ATGLR3.5, GLR6,...	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene65110.t2	GLR3.3,...	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0038.g026158	ATGLR3.1, GLR2,...	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0038.g026160	ATGLR3.1, GLR2,...	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Cba_g32439	GLR3.6, ATGLR3.6	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.01G008100.1	ATGLR3.2,...	ligand-gated cation channel *(GLR) & original...	0.04	OrthoFinder output from all 47 species
Ceric.01G008200.1	ATGLR3.1, GLR2,...	ligand-gated cation channel *(GLR) & original...	0.05	OrthoFinder output from all 47 species
Ceric.01G008500.1	ATGLR3.1, GLR2,...	ligand-gated cation channel *(GLR) & original...	0.04	OrthoFinder output from all 47 species
Ceric.03G069800.1	GLUR3, GLR3.4,...	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Ceric.09G013900.1	GLUR3, GLR3.4,...	ligand-gated cation channel *(GLR) & original...	0.02	OrthoFinder output from all 47 species
Ceric.23G025300.1	Ceric.23G025300	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Ceric.35G032400.1	ATGLR3.1, GLR2,...	ligand-gated cation channel *(GLR) & original...	0.03	OrthoFinder output from all 47 species
Ceric.35G032600.1	ATGLR3.1, GLR2,...	ligand-gated cation channel *(GLR) & original...	0.04	OrthoFinder output from all 47 species
Dac_g40215	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01014244001	GLR2.8, ATGLR2.8	Solute transport.channels.GLR ligand-gated cation channel	0.08	OrthoFinder output from all 47 species
GSVIVT01014251001	GLR2.8, ATGLR2.8	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
GSVIVT01029195001	GLR2.2, ATGLR2.2	Solute transport.channels.GLR ligand-gated cation channel	0.06	OrthoFinder output from all 47 species
GSVIVT01029198001	GLR2.8, ATGLR2.8	Solute transport.channels.GLR ligand-gated cation channel	0.06	OrthoFinder output from all 47 species
GSVIVT01033121001	GLR2.7, ATGLR2.7	Solute transport.channels.GLR ligand-gated cation channel	0.02	OrthoFinder output from all 47 species
GSVIVT01033137001	GLR2.8, ATGLR2.8	Solute transport.channels.GLR ligand-gated cation channel	0.05	OrthoFinder output from all 47 species
Gb_20613	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Gb_27767	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.04	OrthoFinder output from all 47 species
Gb_28362	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Gb_28364	ATGLR3.2,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Gb_39753	GLR2.7, ATGLR2.7	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Gb_39754	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.05	OrthoFinder output from all 47 species
LOC_Os02g54640.1	ATGLR2.9,...	ligand-gated cation channel (GLR)	0.05	OrthoFinder output from all 47 species
LOC_Os06g09050.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
LOC_Os07g01310.1	GLUR3, GLR3.4,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
LOC_Os09g26144.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Len_g10645	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.04	OrthoFinder output from all 47 species
Len_g39997	ATGLR3.1, GLR2,...	ligand-gated cation channel *(GLR) & original description: none	0.04	OrthoFinder output from all 47 species
Len_g46456	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g15365	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g28228	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g29844	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel *(GLR) & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g33545	GLR3.6, ATGLR3.6	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
MA_10426811g0010	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel (GLR)	0.04	OrthoFinder output from all 47 species
MA_10427025g0010	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
MA_10428186g0020	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.05	OrthoFinder output from all 47 species
MA_10428521g0010	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
MA_128033g0010	ATGLR3.5, GLR6, GLR3.5	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
MA_160730g0010	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.02	OrthoFinder output from all 47 species
MA_212254g0010	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
MA_3635444g0010	GLR2.7, ATGLR2.7	ligand-gated cation channel (GLR)	0.04	OrthoFinder output from all 47 species
MA_391859g0010	ATGLR3.2,...	ligand-gated cation channel (GLR)	0.04	OrthoFinder output from all 47 species
MA_43501g0010	GLR3.3, ATGLR3.3	ligand-gated cation channel (GLR)	0.05	OrthoFinder output from all 47 species
MA_46902g0010	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
MA_6222576g0010	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel (GLR)	0.05	OrthoFinder output from all 47 species
MA_958834g0010	ATGLR3.2,...	ligand-gated cation channel (GLR)	0.05	OrthoFinder output from all 47 species
MA_9796468g0010	GLR2.7, ATGLR2.7	ligand-gated cation channel (GLR)	0.04	OrthoFinder output from all 47 species
Ore_g33889	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g46605	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g44319	GLUR3, GLR3.4, ATGLR3.4	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g51319	No alias	ligand-gated cation channel *(GLR) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g077290.2.1	ATGLR2.9,...	ligand-gated cation channel (GLR)	0.06	OrthoFinder output from all 47 species
Solyc04g078860.4.1	ATGLR2.9,...	ligand-gated cation channel (GLR)	0.09	OrthoFinder output from all 47 species
Solyc06g063170.3.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.05	OrthoFinder output from all 47 species
Solyc06g063180.3.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.09	OrthoFinder output from all 47 species
Solyc06g063190.3.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.11	OrthoFinder output from all 47 species
Solyc06g063200.2.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.07	OrthoFinder output from all 47 species
Solyc06g063210.3.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.09	OrthoFinder output from all 47 species
Solyc08g006500.4.1	GLR2.8,...	ligand-gated cation channel (GLR)	0.08	OrthoFinder output from all 47 species
Spa_g41679	GLR3.3, ATGLR3.3	ligand-gated cation channel *(GLR) & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e009847_P001	GLR2.8,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Zm00001e013023_P001	ATGLR3.5, GLR6,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species
Zm00001e023728_P001	GLR2.8,...	ligand-gated cation channel (GLR)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005217	intracellular ligand-gated monoatomic ion channel activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006873	cellular monoatomic ion homeostasis	None	Extended
BP	GO:0006874	cellular calcium ion homeostasis	NAS	Interproscan
BP	GO:0006875	cellular metal ion homeostasis	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	NAS	Interproscan
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated monoatomic ion channel activity	None	Extended
BP	GO:0019725	cellular homeostasis	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0030003	cellular monoatomic cation homeostasis	RCA	Interproscan
BP	GO:0042592	homeostatic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048878	chemical homeostasis	None	Extended
BP	GO:0050801	monoatomic ion homeostasis	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0055065	metal ion homeostasis	None	Extended
BP	GO:0055074	calcium ion homeostasis	None	Extended
BP	GO:0055080	monoatomic cation homeostasis	None	Extended
BP	GO:0055082	cellular chemical homeostasis	None	Extended
BP	GO:0098771	inorganic ion homeostasis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000165	MAPK cascade	IEP	HCCA
BP	GO:0001101	response to acid chemical	IEP	HCCA
BP	GO:0002237	response to molecule of bacterial origin	IEP	HCCA
BP	GO:0002682	regulation of immune system process	IEP	HCCA
BP	GO:0002831	regulation of response to biotic stimulus	IEP	HCCA
BP	GO:0006605	protein targeting	IEP	HCCA
BP	GO:0006612	protein targeting to membrane	IEP	HCCA
BP	GO:0006810	transport	IEP	HCCA
BP	GO:0006865	amino acid transport	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0006984	ER-nucleus signaling pathway	IEP	HCCA
BP	GO:0007154	cell communication	IEP	HCCA
BP	GO:0007165	signal transduction	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009409	response to cold	IEP	HCCA
BP	GO:0009414	response to water deprivation	IEP	HCCA
BP	GO:0009415	response to water	IEP	HCCA
BP	GO:0009581	detection of external stimulus	IEP	HCCA
BP	GO:0009595	detection of biotic stimulus	IEP	HCCA
BP	GO:0009605	response to external stimulus	IEP	HCCA
BP	GO:0009607	response to biotic stimulus	IEP	HCCA
BP	GO:0009617	response to bacterium	IEP	HCCA
BP	GO:0009620	response to fungus	IEP	HCCA
BP	GO:0009627	systemic acquired resistance	IEP	HCCA
BP	GO:0009696	salicylic acid metabolic process	IEP	HCCA
BP	GO:0009697	salicylic acid biosynthetic process	IEP	HCCA
BP	GO:0009755	hormone-mediated signaling pathway	IEP	HCCA
BP	GO:0009862	systemic acquired resistance, salicylic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009863	salicylic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009867	jasmonic acid mediated signaling pathway	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010150	leaf senescence	IEP	HCCA
BP	GO:0010193	response to ozone	IEP	HCCA
BP	GO:0010310	regulation of hydrogen peroxide metabolic process	IEP	HCCA
BP	GO:0010363	regulation of plant-type hypersensitive response	IEP	HCCA
BP	GO:0010941	regulation of cell death	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0015849	organic acid transport	IEP	HCCA
BP	GO:0016053	organic acid biosynthetic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	HCCA
BP	GO:0018958	phenol-containing compound metabolic process	IEP	HCCA
BP	GO:0019374	galactolipid metabolic process	IEP	HCCA
BP	GO:0019375	galactolipid biosynthetic process	IEP	HCCA
BP	GO:0019438	aromatic compound biosynthetic process	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
BP	GO:0031347	regulation of defense response	IEP	HCCA
BP	GO:0031348	negative regulation of defense response	IEP	HCCA
BP	GO:0032101	regulation of response to external stimulus	IEP	HCCA
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0033554	cellular response to stress	IEP	HCCA
BP	GO:0034976	response to endoplasmic reticulum stress	IEP	HCCA
BP	GO:0035556	intracellular signal transduction	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
BP	GO:0042537	benzene-containing compound metabolic process	IEP	HCCA
BP	GO:0042631	cellular response to water deprivation	IEP	HCCA
BP	GO:0042742	defense response to bacterium	IEP	HCCA
BP	GO:0043067	regulation of programmed cell death	IEP	HCCA
BP	GO:0043069	negative regulation of programmed cell death	IEP	HCCA
BP	GO:0043207	response to external biotic stimulus	IEP	HCCA
BP	GO:0043903	regulation of biological process involved in symbiotic interaction	IEP	HCCA
BP	GO:0044283	small molecule biosynthetic process	IEP	HCCA
BP	GO:0044419	biological process involved in interspecies interaction between organisms	IEP	HCCA
BP	GO:0045088	regulation of innate immune response	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0046189	phenol-containing compound biosynthetic process	IEP	HCCA
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
BP	GO:0048523	negative regulation of cellular process	IEP	HCCA
BP	GO:0048583	regulation of response to stimulus	IEP	HCCA
BP	GO:0048585	negative regulation of response to stimulus	IEP	HCCA
BP	GO:0050776	regulation of immune response	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0050832	defense response to fungus	IEP	HCCA
BP	GO:0051179	localization	IEP	HCCA
BP	GO:0051234	establishment of localization	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0051668	localization within membrane	IEP	HCCA
BP	GO:0051707	response to other organism	IEP	HCCA
BP	GO:0051716	cellular response to stimulus	IEP	HCCA
BP	GO:0060548	negative regulation of cell death	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071229	cellular response to acid chemical	IEP	HCCA
BP	GO:0071462	cellular response to water stimulus	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	HCCA
BP	GO:0072657	protein localization to membrane	IEP	HCCA
BP	GO:0080134	regulation of response to stress	IEP	HCCA
BP	GO:0080135	regulation of cellular response to stress	IEP	HCCA
BP	GO:0090150	establishment of protein localization to membrane	IEP	HCCA
BP	GO:0090693	plant organ senescence	IEP	HCCA
BP	GO:0098542	defense response to other organism	IEP	HCCA
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	HCCA
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	HCCA
BP	GO:1901617	organic hydroxy compound biosynthetic process	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:2000377	regulation of reactive oxygen species metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001638	Solute-binding_3/MltF_N	468	787
IPR001320	Iontro_rcpt_C	788	819
IPR001828	ANF_lig-bd_rcpt	46	397

External Links

No external refs found!

AT2G29100 (ATGLR2.9, GLR2.9)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation