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  5. AT2G33620

AT2G33620


Description : AT hook motif DNA-binding family protein


Gene families : OG0000263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G33620

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00054250 ATAHL1, AHL1,... AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00149p00085280 evm_27.TU.AmTr_v1... AT-hook motif nuclear-localized protein 10... 0.06 OrthoFinder output from all 47 species
AT4G12080 ATAHL1, AHL1 AT-hook motif nuclear-localized protein 1 0.04 OrthoFinder output from all 47 species
AT4G22770 No alias AT hook motif DNA-binding family protein 0.05 OrthoFinder output from all 47 species
Aspi01Gene18072.t1 Aspi01Gene18072 AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56436.t1 ATAHL1, AHL1,... AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010299 ATAHL1, AHL1 AHL clade-B transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Azfi_s0159.g053950 No alias AHL clade-B transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g17626 ATAHL1, AHL1 AHL clade-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g24172 ATAHL1, AHL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013426001 No alias AT-hook motif nuclear-localized protein 10... 0.03 OrthoFinder output from all 47 species
GSVIVT01026888001 No alias AT-hook motif nuclear-localized protein 9 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01027617001 ATAHL1, AHL1 AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_26094 No alias AT-hook motif nuclear-localized protein 10... 0.05 OrthoFinder output from all 47 species
LOC_Os09g31470.1 LOC_Os09g31470 AT-hook motif nuclear-localized protein 10... 0.04 OrthoFinder output from all 47 species
LOC_Os10g42230.2 LOC_Os10g42230 AT-hook motif nuclear-localized protein 10... 0.03 OrthoFinder output from all 47 species
Len_g05296 No alias AHL clade-B transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Len_g09064 ATAHL1, AHL1 AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18915 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23090 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_10434727g0010 No alias AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g08536 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15105 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08967 ATAHL1, AHL1 AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g007530.4.1 ATAHL1, AHL1,... AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc08g079630.3.1 ATAHL1, AHL1,... AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc09g008940.4.1 ATAHL1, AHL1,... AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g00865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002444_P001 Zm00001e002444 AT-hook motif nuclear-localized protein 10... 0.04 OrthoFinder output from all 47 species
Zm00001e006494_P001 Zm00001e006494 AT-hook motif nuclear-localized protein 9 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e024390_P002 Zm00001e024390 AT-hook motif nuclear-localized protein 10... 0.03 OrthoFinder output from all 47 species
Zm00001e037798_P002 Zm00001e037798 AT-hook motif nuclear-localized protein 10... 0.03 OrthoFinder output from all 47 species
Zm00001e041401_P002 Zm00001e041401 AT-hook motif nuclear-localized protein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e041967_P001 Zm00001e041967 AT-hook motif nuclear-localized protein 11... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0007389 pattern specification process RCA Interproscan
BP GO:0048438 floral whorl development RCA Interproscan
BP GO:0048439 flower morphogenesis RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0003002 regionalization IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006346 DNA methylation-dependent heterochromatin formation IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009736 cytokinin-activated signaling pathway IEP HCCA
BP GO:0009739 response to gibberellin IEP HCCA
BP GO:0009740 gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009887 animal organ morphogenesis IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010051 xylem and phloem pattern formation IEP HCCA
BP GO:0010073 meristem maintenance IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010311 lateral root formation IEP HCCA
BP GO:0010476 gibberellin mediated signaling pathway IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0031048 RNA-mediated heterochromatin formation IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0031507 heterochromatin formation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0040029 epigenetic regulation of gene expression IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0046982 protein heterodimerization activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
BP GO:0051567 histone H3-K9 methylation IEP HCCA
BP GO:0061647 histone H3-K9 modification IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:0140718 facultative heterochromatin formation IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 164 278
No external refs found!