AT2G33810 (SPL3)

Aliases : SPL3

Description : squamosa promoter binding protein-like 3

Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G33810

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00198330	AtSPL9, SPL9,...	RNA biosynthesis.transcriptional activation.SBP...	0.03	OrthoFinder output from all 47 species
AMTR_s00047p00197010	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.SBP...	0.04	OrthoFinder output from all 47 species
AMTR_s00062p00211520	SPL4,...	RNA biosynthesis.transcriptional activation.SBP...	0.03	OrthoFinder output from all 47 species
Adi_g104940	SPL8	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g112854	SPL10	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g08078	SPL8	SBP-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Aev_g38966	SPL2	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g06099	SPL8	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g08975	SPL8	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g11381	SPL2	SBP-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Als_g25947	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g46381	SPL3	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g47037	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g47133	SPL2	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g17545	SPL8	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g08472	No alias	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene30474.t1	SPL8, Aspi01Gene30474	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene33252.t1	SPL8, Aspi01Gene33252	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s1185.g099051	No alias	not classified & original description: CDS=1-531	0.04	OrthoFinder output from all 47 species
Cba_g10833	SPL8	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g26158	SPL8	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g34343	AtSPL9, SPL9	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g75896	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.20G077800.1	SPL3, Ceric.20G077800	SBP-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Cre02.g104700	SPL2	RNA biosynthesis.transcriptional activation.SBP...	0.02	OrthoFinder output from all 47 species
Cre10.g433350	SPL4	RNA biosynthesis.transcriptional activation.SBP...	0.02	OrthoFinder output from all 47 species
Dac_g16262	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g12554	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g48961	SPL8	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g08477	AtSPL9, SPL9	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g04651	SPL3	SBP-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g05026	SPL8	SBP-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
GSVIVT01018205001	SPL2	RNA biosynthesis.transcriptional activation.SBP...	0.03	OrthoFinder output from all 47 species
GSVIVT01032239001	SPL2	RNA biosynthesis.transcriptional activation.SBP...	0.04	OrthoFinder output from all 47 species
GSVIVT01033064001	SPL13, SPL13A	RNA biosynthesis.transcriptional activation.SBP...	0.04	OrthoFinder output from all 47 species
GSVIVT01033519001	AtSPL9, SPL9	RNA biosynthesis.transcriptional activation.SBP...	0.04	OrthoFinder output from all 47 species
Gb_03922	SPL2	transcription factor (SBP)	0.04	OrthoFinder output from all 47 species
Gb_27198	SPL2	transcription factor (SBP)	0.04	OrthoFinder output from all 47 species
Gb_38013	SPL2	transcription factor (SBP)	0.06	OrthoFinder output from all 47 species
Gb_38014	No alias	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
LOC_Os01g69830.1	SPL13, SPL13A,...	transcription factor (SBP)	0.04	OrthoFinder output from all 47 species
LOC_Os02g08070.1	SPL8, LOC_Os02g08070	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
LOC_Os04g46580.1	SPL3, LOC_Os04g46580	transcription factor (SBP)	0.04	OrthoFinder output from all 47 species
LOC_Os04g56170.1	SPL8, LOC_Os04g56170	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
LOC_Os06g44860.1	SPL8, LOC_Os06g44860	transcription factor (SBP)	0.06	OrthoFinder output from all 47 species
LOC_Os08g39890.1	AtSPL9, SPL9,...	transcription factor (SBP)	0.05	OrthoFinder output from all 47 species
LOC_Os09g31438.1	AtSPL9, SPL9,...	transcription factor (SBP)	0.05	OrthoFinder output from all 47 species
Lfl_g17821	SPL3	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g34702	SPL8	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_10429891g0020	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_10435426g0010	AtSPL9, SPL9	transcription factor (SBP)	0.02	OrthoFinder output from all 47 species
MA_3179g0020	SPL8	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Mp1g10020.1	SPL8	transcription factor (SBP)	0.04	OrthoFinder output from all 47 species
Mp1g10030.1	SPL2	transcription factor (SBP)	0.02	OrthoFinder output from all 47 species
Msp_g25103	SPL11	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g43322	SPL8	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g14903	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g18194	SPL3	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g49101	SPL7, ATSPL7	regulatory protein *(SPL7) of copper homeostasis &...	0.03	OrthoFinder output from all 47 species
Pnu_g03154	SPL8	SBP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g63266	SPL2	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025410	No alias	SBP-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0267.g026971	SPL8	SBP-type transcription factor & original description:...	0.05	OrthoFinder output from all 47 species
Solyc01g090730.3.1	SPL8, Solyc01g090730	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Solyc02g077920.4.1	SPL3, Solyc02g077920	transcription factor (SBP)	0.04	OrthoFinder output from all 47 species
Solyc05g015840.3.1	SPL13, SPL13A,...	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Solyc07g062980.4.1	SPL3, Solyc07g062980	transcription factor (SBP)	0.07	OrthoFinder output from all 47 species
Spa_g13068	AtSPL9, SPL9	SBP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e006686_P001	SPL8, Zm00001e006686	transcription factor (SBP)	0.04	OrthoFinder output from all 47 species
Zm00001e018817_P003	SPL13, SPL13A,...	transcription factor (SBP)	0.04	OrthoFinder output from all 47 species
Zm00001e021425_P001	SPL13, SPL13A,...	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Zm00001e021962_P003	SPL13, SPL13A,...	transcription factor (SBP)	0.05	OrthoFinder output from all 47 species
Zm00001e028442_P002	SPL13, SPL13A,...	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Zm00001e034537_P001	AtSPL9, SPL9,...	transcription factor (SBP)	0.05	OrthoFinder output from all 47 species
Zm00001e041526_P001	SPL3, Zm00001e041526	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IDA	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	TAS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009741	response to brassinosteroid	RCA	Interproscan
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009826	unidimensional cell growth	None	Extended
BP	GO:0009827	plant-type cell wall modification	RCA	Interproscan
BP	GO:0009860	pollen tube growth	RCA	Interproscan
BP	GO:0009886	post-embryonic animal morphogenesis	RCA	Interproscan
BP	GO:0009888	tissue development	None	Extended
BP	GO:0009908	flower development	TAS	Interproscan
BP	GO:0009909	regulation of flower development	RCA	Interproscan
BP	GO:0009911	positive regulation of flower development	IMP	Interproscan
BP	GO:0009932	cell tip growth	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IMP	Interproscan
BP	GO:0010229	inflorescence development	IMP	Interproscan
BP	GO:0010321	regulation of vegetative phase change	IMP	Interproscan
BP	GO:0014070	response to organic cyclic compound	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048367	shoot system development	None	Extended
BP	GO:0048481	plant ovule development	RCA	Interproscan
BP	GO:0048507	meristem development	RCA	Interproscan
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048582	positive regulation of post-embryonic development	None	Extended
BP	GO:0048588	developmental cell growth	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048731	system development	None	Extended
BP	GO:0048831	regulation of shoot system development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051094	positive regulation of developmental process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051240	positive regulation of multicellular organismal process	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090567	reproductive shoot system development	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended
BP	GO:2000243	positive regulation of reproductive process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001708	cell fate specification	IEP	HCCA
BP	GO:0003002	regionalization	IEP	HCCA
MF	GO:0004857	enzyme inhibitor activity	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010093	specification of floral organ identity	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
MF	GO:0046910	pectinesterase inhibitor activity	IEP	HCCA
BP	GO:0048366	leaf development	IEP	HCCA
BP	GO:0048437	floral organ development	IEP	HCCA
BP	GO:0048440	carpel development	IEP	HCCA
BP	GO:0048653	anther development	IEP	HCCA
BP	GO:0048827	phyllome development	IEP	HCCA
BP	GO:0048832	specification of plant organ number	IEP	HCCA
BP	GO:0048833	specification of floral organ number	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:0090701	specification of plant organ identity	IEP	HCCA
MF	GO:0140678	molecular function inhibitor activity	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:1905428	regulation of plant organ formation	IEP	HCCA
BP	GO:2000025	regulation of leaf formation	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	54	127

External Links

No external refs found!

AT2G33810 (SPL3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation