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AT2G34200


Description : RING/FYVE/PHD zinc finger superfamily protein


Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G34200

Target Alias Description ECC score Gene Family Method Actions
Adi_g004048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38573 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g00200 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13386 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.16G080400.1 Ceric.16G080400 not classified & original description: pacid=50588988... 0.05 OrthoFinder output from all 47 species
Dcu_g10607 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g37900.1 LOC_Os05g37900 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g18249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g30316 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007260 No alias not classified & original description: CDS=1-507 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g020018 No alias not classified & original description: CDS=310-1482 0.03 OrthoFinder output from all 47 species
Sam_g37685 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g48929 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g067800.3.1 Solyc01g067800 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
Spa_g51653 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005794 Golgi apparatus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
CC GO:0016020 membrane IDA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 102 160
No external refs found!