AT2G34810

Description : FAD-binding Berberine family protein

Gene families : OG0000307 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000307_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G34810

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00032p00227420	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	OrthoFinder output from all 47 species
AMTR_s00038p00162870	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	OrthoFinder output from all 47 species
AMTR_s00038p00163940	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.06	OrthoFinder output from all 47 species
AMTR_s00038p00164300	evm_27.TU.AmTr_v1...	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	OrthoFinder output from all 47 species
AT1G26380	No alias	FAD-binding Berberine family protein	0.04	OrthoFinder output from all 47 species
AT1G26400	No alias	FAD-binding Berberine family protein	0.04	OrthoFinder output from all 47 species
AT4G20820	No alias	FAD-binding Berberine family protein	0.05	OrthoFinder output from all 47 species
AT5G44380	No alias	FAD-binding Berberine family protein	0.04	OrthoFinder output from all 47 species
Adi_g010017	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Adi_g059834	MEE23, EDA28	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Adi_g082837	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Aev_g39909	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Ala_g04429	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.05	OrthoFinder output from all 47 species
Als_g21711	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Aob_g01764	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Aob_g32306	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Aob_g33483	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Aob_g33484	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene26379.t1	Aspi01Gene26379	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene59090.t1	Aspi01Gene59090	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene64419.t1	Aspi01Gene64419	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.04	OrthoFinder output from all 47 species
Aspi01Gene64456.t2	Aspi01Gene64456	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene68383.t1	Aspi01Gene68383	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.04	OrthoFinder output from all 47 species
Aspi01Gene68384.t1	Aspi01Gene68384	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene70323.t1	Aspi01Gene70323	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Azfi_s0390.g067663	No alias	not classified & original description: CDS=1-906	0.01	OrthoFinder output from all 47 species
Cba_g14534	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Dac_g03939	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Dac_g18868	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Dac_g35172	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Dac_g39613	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Dcu_g10857	MEE23, EDA28	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Dde_g30309	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
GSVIVT01015790001	No alias	Berberine bridge enzyme-like 21 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01020745001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.07	OrthoFinder output from all 47 species
GSVIVT01020746001	No alias	Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
GSVIVT01021723001	No alias	Berberine bridge enzyme-like 11 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01021734001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	OrthoFinder output from all 47 species
GSVIVT01021745001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	OrthoFinder output from all 47 species
GSVIVT01037107001	MEE23, EDA28	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.01	OrthoFinder output from all 47 species
Gb_03609	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	OrthoFinder output from all 47 species
Gb_21183	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	OrthoFinder output from all 47 species
Gb_21186	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	OrthoFinder output from all 47 species
Gb_21188	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	OrthoFinder output from all 47 species
Gb_24404	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	OrthoFinder output from all 47 species
Gb_24405	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	OrthoFinder output from all 47 species
Gb_24415	MEE23, EDA28	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.06	OrthoFinder output from all 47 species
LOC_Os02g14090.1	LOC_Os02g14090	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	OrthoFinder output from all 47 species
LOC_Os06g35560.1	LOC_Os06g35560	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	OrthoFinder output from all 47 species
LOC_Os06g35700.1	LOC_Os06g35700	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	OrthoFinder output from all 47 species
LOC_Os08g06170.1	LOC_Os08g06170	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	OrthoFinder output from all 47 species
LOC_Os08g06190.1	LOC_Os08g06190	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	OrthoFinder output from all 47 species
Lfl_g08169	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
MA_10427412g0010	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	OrthoFinder output from all 47 species
MA_10428737g0010	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	OrthoFinder output from all 47 species
MA_186285g0010	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	OrthoFinder output from all 47 species
MA_228933g0010	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	OrthoFinder output from all 47 species
MA_260168g0010	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	OrthoFinder output from all 47 species
MA_26891g0010	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	OrthoFinder output from all 47 species
MA_4996228g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Mp1g25840.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	OrthoFinder output from all 47 species
Mp7g02610.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	OrthoFinder output from all 47 species
Msp_g44295	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Nbi_g21792	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Ore_g30060	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Ore_g38675	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Pnu_g21779	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.04	OrthoFinder output from all 47 species
Pnu_g21973	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Solyc02g070070.1.1	Solyc02g070070	Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc02g070090.1.1	Solyc02g070090	Berberine bridge enzyme-like 8 OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
Solyc02g070110.1.1	Solyc02g070110	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	OrthoFinder output from all 47 species
Solyc02g070120.1.1	Solyc02g070120	Cannabidiolic acid synthase OS=Cannabis sativa...	0.03	OrthoFinder output from all 47 species
Solyc02g079440.3.1	Solyc02g079440	Berberine bridge enzyme-like 22 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
Solyc02g079480.1.1	Solyc02g079480	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	OrthoFinder output from all 47 species
Solyc06g065060.1.1	Solyc06g065060	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.07	OrthoFinder output from all 47 species
Solyc10g054540.1.1	Solyc10g054540	Berberine bridge enzyme-like 26 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Spa_g46286	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor &...	0.02	OrthoFinder output from all 47 species
Tin_g23513	No alias	EC_1.1 oxidoreductase acTing on CH-OH group of donor &...	0.03	OrthoFinder output from all 47 species
Zm00001e014361_P001	Zm00001e014361	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	OrthoFinder output from all 47 species
Zm00001e030681_P001	Zm00001e030681	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	OrthoFinder output from all 47 species
Zm00001e035614_P001	Zm00001e035614	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	OrthoFinder output from all 47 species
Zm00001e037256_P001	Zm00001e037256	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	OrthoFinder output from all 47 species
Zm00001e042367_P001	Zm00001e042367	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	OrthoFinder output from all 47 species
Zm00001e042369_P001	Zm00001e042369	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
MF	GO:0009055	electron transfer activity	ISS	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009611	response to wounding	IEP	Interproscan
BP	GO:0009611	response to wounding	RCA	Interproscan
BP	GO:0009620	response to fungus	RCA	Interproscan
BP	GO:0009694	jasmonic acid metabolic process	None	Extended
BP	GO:0009695	jasmonic acid biosynthetic process	RCA	Interproscan
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009753	response to jasmonic acid	IEP	Interproscan
BP	GO:0009753	response to jasmonic acid	RCA	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009867	jasmonic acid mediated signaling pathway	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033993	response to lipid	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0070542	response to fatty acid	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000162	tryptophan biosynthetic process	IEP	HCCA
BP	GO:0001101	response to acid chemical	IEP	HCCA
BP	GO:0001676	long-chain fatty acid metabolic process	IEP	HCCA
MF	GO:0004033	aldo-keto reductase (NADP) activity	IEP	HCCA
MF	GO:0004333	fumarate hydratase activity	IEP	HCCA
MF	GO:0004707	MAP kinase activity	IEP	HCCA
MF	GO:0004766	spermidine synthase activity	IEP	HCCA
MF	GO:0004834	tryptophan synthase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
CC	GO:0005811	lipid droplet	IEP	HCCA
BP	GO:0006106	fumarate metabolic process	IEP	HCCA
BP	GO:0006576	biogenic amine metabolic process	IEP	HCCA
BP	GO:0006595	polyamine metabolic process	IEP	HCCA
BP	GO:0006596	polyamine biosynthetic process	IEP	HCCA
BP	GO:0006598	polyamine catabolic process	IEP	HCCA
BP	GO:0006631	fatty acid metabolic process	IEP	HCCA
BP	GO:0006636	unsaturated fatty acid biosynthetic process	IEP	HCCA
BP	GO:0006690	icosanoid metabolic process	IEP	HCCA
BP	GO:0006714	sesquiterpenoid metabolic process	IEP	HCCA
BP	GO:0006970	response to osmotic stress	IEP	HCCA
BP	GO:0006972	hyperosmotic response	IEP	HCCA
MF	GO:0008106	alcohol dehydrogenase (NADP+) activity	IEP	HCCA
MF	GO:0008131	primary amine oxidase activity	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0008374	O-acyltransferase activity	IEP	HCCA
BP	GO:0009266	response to temperature stimulus	IEP	HCCA
BP	GO:0009269	response to desiccation	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
BP	GO:0009309	amine biosynthetic process	IEP	HCCA
BP	GO:0009310	amine catabolic process	IEP	HCCA
BP	GO:0009409	response to cold	IEP	HCCA
BP	GO:0009414	response to water deprivation	IEP	HCCA
BP	GO:0009415	response to water	IEP	HCCA
BP	GO:0009625	response to insect	IEP	HCCA
BP	GO:0009628	response to abiotic stimulus	IEP	HCCA
BP	GO:0009651	response to salt stress	IEP	HCCA
BP	GO:0009737	response to abscisic acid	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010118	stomatal movement	IEP	HCCA
MF	GO:0010327	acetyl CoA:(Z)-3-hexen-1-ol acetyltransferase activity	IEP	HCCA
MF	GO:0010333	terpene synthase activity	IEP	HCCA
MF	GO:0010334	sesquiterpene synthase activity	IEP	HCCA
BP	GO:0010597	green leaf volatile biosynthetic process	IEP	HCCA
CC	GO:0012511	monolayer-surrounded lipid storage body	IEP	HCCA
MF	GO:0015020	glucuronosyltransferase activity	IEP	HCCA
BP	GO:0016106	sesquiterpenoid biosynthetic process	IEP	HCCA
MF	GO:0016229	steroid dehydrogenase activity	IEP	HCCA
MF	GO:0016407	acetyltransferase activity	IEP	HCCA
MF	GO:0016413	O-acetyltransferase activity	IEP	HCCA
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	HCCA
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	HCCA
MF	GO:0016647	oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016768	spermine synthase activity	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	HCCA
BP	GO:0019372	lipoxygenase pathway	IEP	HCCA
BP	GO:0031347	regulation of defense response	IEP	HCCA
BP	GO:0031407	oxylipin metabolic process	IEP	HCCA
CC	GO:0031969	chloroplast membrane	IEP	HCCA
BP	GO:0033559	unsaturated fatty acid metabolic process	IEP	HCCA
MF	GO:0034768	(E)-beta-ocimene synthase activity	IEP	HCCA
BP	GO:0040034	regulation of development, heterochronic	IEP	HCCA
BP	GO:0042126	nitrate metabolic process	IEP	HCCA
BP	GO:0042128	nitrate assimilation	IEP	HCCA
BP	GO:0042401	biogenic amine biosynthetic process	IEP	HCCA
BP	GO:0042402	cellular biogenic amine catabolic process	IEP	HCCA
BP	GO:0042538	hyperosmotic salinity response	IEP	HCCA
BP	GO:0042631	cellular response to water deprivation	IEP	HCCA
BP	GO:0042759	long-chain fatty acid biosynthetic process	IEP	HCCA
BP	GO:0043648	dicarboxylic acid metabolic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0045962	positive regulation of development, heterochronic	IEP	HCCA
BP	GO:0046219	indolalkylamine biosynthetic process	IEP	HCCA
MF	GO:0046592	polyamine oxidase activity	IEP	HCCA
MF	GO:0050551	myrcene synthase activity	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA
MF	GO:0052578	alpha-farnesene synthase activity	IEP	HCCA
BP	GO:0055114	obsolete oxidation-reduction process	IEP	HCCA
MF	GO:0070401	NADP+ binding	IEP	HCCA
BP	GO:0071229	cellular response to acid chemical	IEP	HCCA
BP	GO:0071462	cellular response to water stimulus	IEP	HCCA
BP	GO:0071941	nitrogen cycle metabolic process	IEP	HCCA
MF	GO:0080043	quercetin 3-O-glucosyltransferase activity	IEP	HCCA
MF	GO:0080044	quercetin 7-O-glucosyltransferase activity	IEP	HCCA
BP	GO:0080134	regulation of response to stress	IEP	HCCA
BP	GO:0097305	response to alcohol	IEP	HCCA
BP	GO:1902609	(R)-2-hydroxy-alpha-linolenic acid biosynthetic process	IEP	HCCA
MF	GO:1990137	plant seed peroxidase activity	IEP	HCCA
BP	GO:2001057	reactive nitrogen species metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006094	Oxid_FAD_bind_N	83	220
IPR012951	BBE	479	537

External Links

No external refs found!

AT2G34810

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation