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  5. AT2G35510

AT2G35510 (SRO1)


Aliases : SRO1

Description : similar to RCD one 1


Gene families : OG0000733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000733_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G35510
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Aob_g26676 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Aop_g13070 SRO5 organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Cba_g08763 SRO1 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Ceric.15G016700.1 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Dde_g17490 SRO1 organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Msp_g03984 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g25860 AtRCD1, RCD1,... organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species
Spa_g12730 SRO1 organellar-signalling mediator *(RCD1) & original... 0.03 OrthoFinder output from all 47 species
Tin_g10681 SRO1 organellar-signalling mediator *(RCD1) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006970 response to osmotic stress IMP Interproscan
BP GO:0006979 response to oxidative stress IMP Interproscan
BP GO:0009651 response to salt stress IMP Interproscan
BP GO:0010102 lateral root morphogenesis IMP Interproscan
BP GO:0048573 photoperiodism, flowering IMP Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0006220 pyrimidine nucleotide metabolic process IEP HCCA
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP HCCA
BP GO:0006354 DNA-templated transcription elongation IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
MF GO:0008320 protein transmembrane transporter activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009218 pyrimidine ribonucleotide metabolic process IEP HCCA
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
MF GO:0015450 protein-transporting ATPase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0022884 macromolecule transmembrane transporter activity IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045140 inositol phosphoceramide synthase activity IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140318 protein transporter activity IEP HCCA
BP GO:0140352 export from cell IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
InterPro domains Description Start Stop
IPR022003 RST 498 564
IPR012317 Poly(ADP-ribose)pol_cat_dom 316 400
No external refs found!