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  5. AT2G35990

AT2G35990


Description : Putative lysine decarboxylase family protein


Gene families : OG0000622 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000622_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G35990

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00241960 evm_27.TU.AmTr_v1... Phytohormones.cytokinin.synthesis.cytokinin phosphoribohydrolase 0.04 OrthoFinder output from all 47 species
AMTR_s00001p00242250 evm_27.TU.AmTr_v1... Phytohormones.cytokinin.synthesis.cytokinin phosphoribohydrolase 0.03 OrthoFinder output from all 47 species
AMTR_s00030p00225360 No alias Phytohormones.cytokinin.synthesis.cytokinin phosphoribohydrolase 0.05 OrthoFinder output from all 47 species
AT5G06300 No alias Putative lysine decarboxylase family protein 0.03 OrthoFinder output from all 47 species
Ala_g03118 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
Als_g00402 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.04 OrthoFinder output from all 47 species
Als_g11845 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Aop_g02441 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0069.g036541 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
Cba_g10138 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Cba_g21576 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Ceric.11G035200.1 Ceric.11G035200 cytokinin phosphoribohydrolase *(LOG) & original... 0.05 OrthoFinder output from all 47 species
Ceric.11G045200.1 LOG1, ATLOG1,... cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g18882 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g31708 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01033934001 No alias Phytohormones.cytokinin.synthesis.cytokinin phosphoribohydrolase 0.03 OrthoFinder output from all 47 species
Gb_24266 LOG1, ATLOG1 cytokinin phosphoribohydrolase 0.06 OrthoFinder output from all 47 species
Gb_31493 LOG1, ATLOG1 cytokinin phosphoribohydrolase 0.02 OrthoFinder output from all 47 species
LOC_Os03g64070.1 LOC_Os03g64070 cytokinin phosphoribohydrolase 0.04 OrthoFinder output from all 47 species
LOC_Os04g43840.1 LOG1, ATLOG1,... cytokinin phosphoribohydrolase 0.03 OrthoFinder output from all 47 species
LOC_Os05g51390.1 LOC_Os05g51390 cytokinin phosphoribohydrolase 0.04 OrthoFinder output from all 47 species
Lfl_g10038 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g17569 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.04 OrthoFinder output from all 47 species
MA_139604g0010 No alias cytokinin phosphoribohydrolase 0.02 OrthoFinder output from all 47 species
MA_47673g0010 No alias cytokinin phosphoribohydrolase 0.06 OrthoFinder output from all 47 species
Msp_g39261 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
Msp_g43815 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g00271 LOG1, ATLOG1 cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
Pir_g30036 No alias cytokinin phosphoribohydrolase *(LOG) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005129 No alias not classified & original description: CDS=339-968 0.03 OrthoFinder output from all 47 species
Smo402882 LOG1, ATLOG1 Phytohormones.cytokinin.synthesis.cytokinin phosphoribohydrolase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005829 cytosol IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
MF GO:0005385 zinc ion transmembrane transporter activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0006829 zinc ion transport IEP HCCA
BP GO:0007043 cell-cell junction assembly IEP HCCA
BP GO:0010053 root epidermal cell differentiation IEP HCCA
BP GO:0010054 trichoblast differentiation IEP HCCA
BP GO:0010106 cellular response to iron ion starvation IEP HCCA
BP GO:0010383 cell wall polysaccharide metabolic process IEP HCCA
BP GO:0010410 hemicellulose metabolic process IEP HCCA
BP GO:0010411 xyloglucan metabolic process IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
BP GO:0034329 cell junction assembly IEP HCCA
BP GO:0034330 cell junction organization IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045216 cell-cell junction organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
CC GO:0048226 Casparian strip IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0090627 plant epidermal cell differentiation IEP HCCA
InterPro domains Description Start Stop
IPR031100 LOG_fam 53 181
No external refs found!