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  5. AT2G38410

AT2G38410


Description : ENTH/VHS/GAT family protein


Gene families : OG0000393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G38410

Target Alias Description ECC score Gene Family Method Actions
Adi_g008165 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06569 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02040.t1 Aspi01Gene02040 ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0162.g054173 No alias ubiquitin adaptor protein *(TOL) & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g12993 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.35G060000.1 Ceric.35G060000 ubiquitin adaptor protein *(TOL) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g05715 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g46962.1 LOC_Os02g46962 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
Len_g08802 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g07938 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01965 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g27874 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g46320 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g07312 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g063280.3.1 Solyc04g063280 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
Solyc08g068370.3.1 Solyc08g068370 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
Solyc10g044750.3.1 Solyc10g044750 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g05647 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g28672 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g29356 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11081 No alias ubiquiTin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005795 Golgi stack ISS Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006886 intracellular protein transport ISS Interproscan
BP GO:0006891 intra-Golgi vesicle-mediated transport ISS Interproscan
MF GO:0008565 obsolete protein transporter activity ISS Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009696 salicylic acid metabolic process IEP HCCA
BP GO:0009697 salicylic acid biosynthetic process IEP HCCA
BP GO:0010029 regulation of seed germination IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0018958 phenol-containing compound metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0032957 inositol trisphosphate metabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046189 phenol-containing compound biosynthetic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
MF GO:0046982 protein heterodimerization activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
BP GO:1900140 regulation of seedling development IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002014 VHS_dom 6 129
IPR004152 GAT_dom 245 317
No external refs found!