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  5. AT2G39350

AT2G39350


Description : ABC-2 type transporter family protein


Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G39350

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00208620 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
Als_g14907 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g03340 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000057.55 No alias ABC transporter G family member 15 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000270.12 ATPDR3, PDR3 ABC transporter G family member 31 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dcu_g25490 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g28101 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30393 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003847001 No alias ABC transporter G family member 17 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01028809001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
LOC_Os03g17350.1 LOC_Os03g17350 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os05g02890.1 LOC_Os05g02890 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Mp1g25240.1 No alias subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Solyc03g113690.1.1 Solyc03g113690 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc09g005970.1.1 Solyc09g005970 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Tin_g40098 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019365_P001 Zm00001e019365 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0006865 amino acid transport RCA Interproscan
BP GO:0009624 response to nematode IEP Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade IEP HCCA
BP GO:0002682 regulation of immune system process IEP HCCA
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
MF GO:0004352 glutamate dehydrogenase (NAD+) activity IEP HCCA
MF GO:0004353 glutamate dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0004362 glutathione-disulfide reductase (NADPH) activity IEP HCCA
MF GO:0004364 glutathione transferase activity IEP HCCA
MF GO:0005342 organic acid transmembrane transporter activity IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006598 polyamine catabolic process IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0007154 cell communication IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009310 amine catabolic process IEP HCCA
BP GO:0009404 toxin metabolic process IEP HCCA
BP GO:0009407 toxin catabolic process IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009863 salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0010036 response to boron-containing substance IEP HCCA
CC GO:0010319 stromule IEP HCCA
BP GO:0010363 regulation of plant-type hypersensitive response IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0010941 regulation of cell death IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0015038 glutathione disulfide oxidoreductase activity IEP HCCA
MF GO:0015171 amino acid transmembrane transporter activity IEP HCCA
MF GO:0015175 neutral L-amino acid transmembrane transporter activity IEP HCCA
MF GO:0015179 L-amino acid transmembrane transporter activity IEP HCCA
MF GO:0015193 L-proline transmembrane transporter activity IEP HCCA
BP GO:0015804 neutral amino acid transport IEP HCCA
BP GO:0015824 proline transport IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016639 oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019748 secondary metabolic process IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0031348 negative regulation of defense response IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0042402 cellular biogenic amine catabolic process IEP HCCA
BP GO:0043067 regulation of programmed cell death IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043295 glutathione binding IEP HCCA
BP GO:0043903 regulation of biological process involved in symbiotic interaction IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0045088 regulation of innate immune response IEP HCCA
BP GO:0046482 para-aminobenzoic acid metabolic process IEP HCCA
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP HCCA
MF GO:0047134 protein-disulfide reductase (NAD(P)) activity IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0048585 negative regulation of response to stimulus IEP HCCA
BP GO:0050776 regulation of immune response IEP HCCA
MF GO:0050897 cobalt ion binding IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0062197 cellular response to chemical stress IEP HCCA
MF GO:0072341 modified amino acid binding IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0080029 cellular response to boron-containing substance levels IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:0080169 cellular response to boron-containing substance deprivation IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0098754 detoxification IEP HCCA
MF GO:1900750 oligopeptide binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 110 262
IPR013525 ABC_2_trans 436 644
No external refs found!