AT2G39700 (ATEXPA4, ATEXP4,...)

Aliases : ATEXPA4, ATEXP4, EXPA4, ATHEXP ALPHA 1.6

Description : expansin A4

Gene families : OG0000032 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G39700

Target	Alias	Description	ECC score	Gene Family Method
AT4G38400	ATEXPL2, EXPL2,...	expansin-like A2	0.01	OrthoFinder output from all 47 species
Aev_g17361	ATEXPA10,...	alpha-class expansin & original description: none	0.01	OrthoFinder output from all 47 species
Aob_g13780	ATEXPA3, EXP3,...	alpha-class expansin & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
CC	GO:0005618	cell wall	None	Extended
CC	GO:0005829	cytosol	IDA	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
BP	GO:0006949	syncytium formation	IEP	Interproscan
BP	GO:0006949	syncytium formation	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009505	plant-type cell wall	IDA	Interproscan
CC	GO:0009506	plasmodesma	IDA	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009664	plant-type cell wall organization	None	Extended
BP	GO:0009826	unidimensional cell growth	ISS	Interproscan
BP	GO:0009826	unidimensional cell growth	NAS	Interproscan
BP	GO:0009827	plant-type cell wall modification	None	Extended
BP	GO:0009828	plant-type cell wall loosening	ISS	Interproscan
BP	GO:0009828	plant-type cell wall loosening	NAS	Interproscan
BP	GO:0009831	plant-type cell wall modification involved in multidimensional cell growth	ISS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016049	cell growth	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042545	cell wall modification	None	Extended
BP	GO:0042547	cell wall modification involved in multidimensional cell growth	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048589	developmental growth	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0060560	developmental growth involved in morphogenesis	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071669	plant-type cell wall organization or biogenesis	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007117	Expansin_CBD	164	241
IPR009009	RlpA-like_DPBB	66	153

External Links

No external refs found!

AT2G39700 (ATEXPA4, ATEXP4,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation