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AT2G41410


Description : Calcium-binding EF-hand family protein


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G41410

Target Alias Description ECC score Gene Family Method Actions
AT1G66400 CML23 calmodulin like 23 0.03 OrthoFinder output from all 47 species
Adi_g057946 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057947 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03796 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g35874 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g43415 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57972 No alias calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g00912 No alias calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g17306 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07768.t1 Aspi01Gene07768 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40089.t1 Aspi01Gene40089 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40092.t2 Aspi01Gene40092 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene60554.t1 Aspi01Gene60554 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67146.t1 Aspi01Gene67146 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.23G032100.1 Ceric.23G032100 calcium sensor *(CML) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.33G026800.1 Ceric.33G026800 calcium sensor *(CML) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g08581 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09259 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g00276 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g02444 TCH2, CML24 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10805 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01031752001 No alias Calmodulin-like protein 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01033567001 No alias Probable calcium-binding protein CML36 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_03898 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_35180 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
LOC_Os01g04330.1 LOC_Os01g04330 Probable calcium-binding protein CML16 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os01g72080.1 LOC_Os01g72080 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g72100.1 LOC_Os01g72100 Probable calcium-binding protein CML10 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os05g31620.1 LOC_Os05g31620 Probable calcium-binding protein CML15 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os11g04560.1 LOC_Os11g04560 Probable calcium-binding protein CML36 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Lfl_g22348 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26952 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g30167 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g20815 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04785 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01131 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g21746 No alias calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g27721 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009869 No alias calcium sensor *(CML) & original description: CDS=1-726 0.03 OrthoFinder output from all 47 species
Solyc03g118810.1.1 Solyc03g118810 Calcium-binding allergen Ole e 8 OS=Olea europaea... 0.07 OrthoFinder output from all 47 species
Solyc04g018110.1.1 Solyc04g018110 Probable calcium-binding protein CML35 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g10112 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018643_P001 Zm00001e018643 Probable calcium-binding protein CML10 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP HCCA
CC GO:0000815 ESCRT III complex IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005770 late endosome IEP HCCA
CC GO:0005771 multivesicular body IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 144 207
IPR002048 EF_hand_dom 71 129
No external refs found!